HOMD ::Genus:Neisseria

Genus: Neisseria

Full Lineage: Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria
Lower rank member(s): show[+]

[Species:Neisseria bacilliformis] [Species:Neisseria cinerea] [Species:Neisseria elongata] [Species:Neisseria flava] [Species:Neisseria flavescens]
[Species:Neisseria gonorrhoeae] [Species:Neisseria lactamica] [Species:Neisseria macacae] [Species:Neisseria meningitidis] [Species:Neisseria mucosa]
[Species:Neisseria oralis] [Species:Neisseria perflava] [Species:Neisseria polysaccharea] [Species:Neisseria sicca] [Species:Neisseria sp. HMT-018]
[Species:Neisseria sp. HMT-020] [Species:Neisseria sp. HMT-499] [Species:Neisseria sp. HMT-523] [Species:Neisseria subflava] [Species:Neisseria weaveri]

LINKS: Ecology Home | Life Page: Neisseria

Hide Legend

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Neisseria

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	4.99	6.80	1.41	3.30	3.22	4.25	6.65	11.05	8.49	8.82	0.69	0.48	0.27	2.30	0.01	0.45	0.17	0.04
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.88	0.92	0.01	0.04	0.29	4.25	2.20	0.03	0.30	0.17	0.01	0	0	2.30	0	0	0	0
90^thp	12.28	14.77	5.12	7.60	8.13	4.25	11.66	26.66	22.98	23.79	0.70	0.39	0.42	2.30	0.01	1.12	0.09	0.02
Stdev	4.45	6.83	3.31	3.36	3.85	0	4.26	12.61	12.84	10.17	2.74	1.73	0.80	0	0.01	1.21	1.11	0.38
Prev(%)	91.67	97.47	33.33	66.67	74.92	100.00	87.50	71.43	77.27	94.56	4.62	4.35	10.00	0	0	12.50	2.13	1.33

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	5.70	6.84	2.15	3.07	4.09	4.73	6.12	6.32	9.89	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.18	0.33	0	0.16	0.35	0.52	0.14	0.12	0.07	0
90^thp	15.00	16.79	7.30	6.90	8.86	11.53	16.10	15.79	28.30	0
Stdev	7.72	7.60	4.67	3.92	4.04	4.92	8.53	8.20	11.37	0.03
Prev(%)	96.10	98.70	83.12	97.40	98.70	98.70	94.81	96.10	98.70	9.09

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	4.30	6.94	2.08	3.50	5.58	6.29	5.50	5.30	10.35	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.28	0.74	0	0.33	0.49	0.68	0.12	0.14	0.25	0
90^thp	10.60	16.45	6.56	7.92	13.99	14.28	14.03	15.51	27.15	0
Stdev	5.57	6.70	4.47	3.92	6.03	6.19	7.17	6.22	11.38	0
Prev(%)	96.62	99.32	85.14	99.32	99.32	98.65	97.30	95.95	98.65	2.80

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	6.45	8.04	3.09	4.12	4.97	4.88	7.32	6.44	9.12	0.33	0.26	0.16	0.45	0.63	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.49	1.03	0.01	0.19	0.36	0.46	0.19	0.13	0.09	0	0	0	0	0	0	0	0	0
90^thp	15.08	19.06	9.35	10.54	11.39	11.20	20.83	19.32	24.32	0.55	0.27	0.24	1.34	1.27	0	0	0	0
Stdev	7.48	8.57	5.19	4.43	6.05	5.45	11.40	8.98	9.76	1.94	1.74	0.69	0.93	1.77	0	0	0	0
Prev(%)	98.67	99.34	90.21	95.89	97.99	98.46	97.62	97.33	98.71	65.00	50.86	40.23	58.05	57.14	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.23	1.68	3.18	3.46	6.76	5.34	7.82	5.85	10.19	0.19	0.58	0.62	0.71	1.12	0	0	0	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.03	0	0.14	0.36	0.31	0.08	0.11	0.21	0	0	0	0	0	0	0	0	0
90^thp	3.22	4.59	9.73	8.21	16.02	14.14	20.61	17.25	26.02	0.16	0.20	0.60	1.19	1.56	0	0	0	0
Stdev	2.65	2.88	6.15	4.28	7.55	6.19	12.56	7.66	10.95	1.99	4.14	3.37	2.50	4.11	0	0	0	0.05
Prev(%)	87.65	94.63	82.47	95.53	97.19	97.92	93.77	96.35	96.35	31.80	30.89	36.73	48.28	52.67	0	0	0	8.27

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	2.19	1.59	3.35	3.30	5.68	5.82	4.51	3.69	6.96	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0.03	0.01	0.03	0.34	0.06	0.07	0.07	0.11	0
90^thp	5.91	2.83	11.18	7.08	16.02	18.63	11.91	10.02	17.14	0.02
Stdev	4.93	3.65	8.09	5.23	7.68	8.17	6.65	4.85	9.97	0.02
Prev(%)	94.59	100.00	97.67	100.00	100.00	98.00	96.97	96.77	100.00	30.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	3.66	5.76	1.38	3.08	3.44	5.85	6.12	14.36	7.35	9.04	0.41	0.05	0.14	2.12	0.06	0.21	0.20	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.67	0.63	0	0	0.13	5.85	1.28	0	0.03	0.13	0	0	0	2.12	0	0	0	0
90^thp	8.89	12.77	4.28	8.89	8.37	5.85	10.63	33.28	18.51	23.48	0.28	0.20	0.11	2.12	0	0	0.05	0
Stdev	3.34	5.76	3.58	3.75	4.27	0	3.96	14.71	12.26	10.72	2.02	0.12	0.57	0	0.18	0.80	1.26	0.17
Prev(%)	91.67	98.23	45.83	76.47	94.15	100.00	87.50	81.25	92.00	96.71	22.52	45.83	28.13	100.00	9.09	7.14	14.14	3.46

[Species:Neisseria bacilliformis]	[Species:Neisseria cinerea]	[Species:Neisseria elongata]	[Species:Neisseria flava]	[Species:Neisseria flavescens]
[Species:Neisseria gonorrhoeae]	[Species:Neisseria lactamica]	[Species:Neisseria macacae]	[Species:Neisseria meningitidis]	[Species:Neisseria mucosa]
[Species:Neisseria oralis]	[Species:Neisseria perflava]	[Species:Neisseria polysaccharea]	[Species:Neisseria sicca]	[Species:Neisseria sp. HMT-018]
[Species:Neisseria sp. HMT-020]	[Species:Neisseria sp. HMT-499]	[Species:Neisseria sp. HMT-523]	[Species:Neisseria subflava]	[Species:Neisseria weaveri]

Copyright 2007-2025, The Forsyth Institute
Hosted on Amazon AWS EC2

Body Site Legend: