Species: Neisseria elongata (HMT-0598) Primary Body Site: Oral
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| HMT-0598: [Body Sites Data]
[Taxon Description]
| Life Page: Neisseria elongata
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 1.17 | 1.48 | 0.13 | 0.11 | 0.13 | 0.04 | 0.49 | 0.07 | 0.05 | 0.06 | 0.02 | 0.02 | 0.01 | 0.12 | 0 | 0.29 | 0.01 | 0 |
| n | 24 | 395 | 24 | 15 | 323 | 1 | 8 | 7 | 22 | 423 | 65 | 23 | 30 | 1 | 4 | 8 | 94 | 375 |
| 10thp | 0.07 | 0.12 | 0 | 0 | 0.01 | 0.04 | 0.06 | 0 | 0.01 | 0 | 0 | 0 | 0 | 0.12 | 0 | 0 | 0 | 0 |
| 90thp | 2.57 | 3.53 | 0.31 | 0.27 | 0.28 | 0.04 | 1.01 | 0.16 | 0.11 | 0.16 | 0.06 | 0.02 | 0.02 | 0.12 | 0 | 0.71 | 0.01 | 0 |
| Stdev | 1.21 | 1.66 | 0.31 | 0.20 | 0.19 | 0 | 0.64 | 0.07 | 0.05 | 0.07 | 0.03 | 0.05 | 0.04 | 0 | 0 | 0.83 | 0.03 | 0.02 |
| Prev(%) | 79.17 | 91.65 | 16.67 | 20.00 | 23.22 | 0 | 37.50 | 28.57 | 4.55 | 25.30 | 1.54 | 0 | 3.33 | 0 | 0 | 12.50 | 0 | 0.27 |
Eren V1-V3 www.pnas.org
(Data from healthy subjects.)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 1.35 | 1.67 | 0.02 | 0.10 | 0.10 | 0.20 | 0.07 | 0.02 | 0.02 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 4.06 | 4.13 | 0.06 | 0.14 | 0.21 | 0.66 | 0.07 | 0.06 | 0.08 | 0 |
| Stdev | 2.36 | 2.19 | 0.04 | 0.30 | 0.35 | 0.31 | 0.46 | 0.06 | 0.05 | 0 |
| Prev(%) | 81.82 | 87.01 | 31.17 | 55.84 | 49.35 | 70.13 | 31.17 | 31.17 | 27.27 | 0 |
Eren V3-V5 www.pnas.org
(Data from healthy subjects.)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.86 | 1.23 | 0.02 | 0.06 | 0.11 | 0.21 | 0.02 | 0.03 | 0.02 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 1.92 | 2.74 | 0.06 | 0.16 | 0.14 | 0.43 | 0.04 | 0.07 | 0.05 | 0 |
| Stdev | 1.78 | 1.53 | 0.06 | 0.11 | 0.69 | 0.61 | 0.07 | 0.08 | 0.05 | 0 |
| Prev(%) | 79.05 | 89.86 | 22.97 | 50.68 | 50.68 | 70.95 | 26.35 | 31.76 | 32.43 | 0 |
Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 1.57 | 1.95 | 0.10 | 0.15 | 0.10 | 0.28 | 0.06 | 0.03 | 0.04 | 0.02 | 0.03 | 0.03 | 0.05 | 0.05 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0.07 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 4.07 | 5.08 | 0.19 | 0.41 | 0.24 | 0.80 | 0.09 | 0.04 | 0.04 | 0.04 | 0.02 | 0 | 0.07 | 0.07 | 0 | 0 | 0 | 0 |
| Stdev | 2.36 | 2.53 | 0.31 | 0.32 | 0.29 | 0.50 | 0.30 | 0.13 | 0.26 | 0.13 | 0.27 | 0.22 | 0.23 | 0.24 | 0 | 0 | 0 | 0 |
| Prev(%) | 88.08 | 92.72 | 49.65 | 67.12 | 55.70 | 75.39 | 33.04 | 43.33 | 39.35 | 19.00 | 14.94 | 9.91 | 17.24 | 15.21 | 0 | 0 | 0 | 0 |
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
Notes:
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
| Avg (%) | 0.48 | 0.41 | 0.03 | 0.09 | 0.12 | 0.05 | 0.01 | 0.03 | 0.01 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 1.35 | 1.09 | 0.11 | 0.22 | 0.22 | 0.14 | 0.02 | 0.07 | 0.03 | 0 |
| Stdev | 1.05 | 0.55 | 0.06 | 0.16 | 0.27 | 0.07 | 0.02 | 0.12 | 0.02 | 0.01 |
| Prev(%) | 77.03 | 94.12 | 55.81 | 85.71 | 82.14 | 84.00 | 63.64 | 54.84 | 60.00 | 10.00 |
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 1.31 | 1.94 | 0.16 | 0.14 | 0.13 | 0 | 0.47 | 0.01 | 0.01 | 0.02 | 0.02 | 0.01 | 0.01 | 0 | 0 | 0.20 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0.06 | 0 | 0 | 0 | 0 | 0.02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 3.20 | 4.98 | 0.33 | 0.26 | 0.32 | 0 | 1.18 | 0.03 | 0.03 | 0.05 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Stdev | 1.32 | 2.37 | 0.44 | 0.42 | 0.34 | 0 | 0.75 | 0.01 | 0.01 | 0.04 | 0.30 | 0.06 | 0.03 | 0 | 0 | 0.74 | 0.03 | 0.02 |
| Prev(%) | 79.17 | 93.69 | 29.17 | 29.41 | 47.87 | 0 | 87.50 | 18.75 | 20.00 | 32.86 | 3.15 | 4.17 | 6.25 | 0 | 0 | 7.14 | 2.52 | 0.36 |
