HOMD ::Species:Parvisynbacter sp. HMT-348

Species: Parvisynbacter sp. HMT-348 (HMT-0348) Primary Body Site: Oral

Full Lineage: Bacteria; Patescibacteria; Saccharimonadia; Saccharimonadales; Parvisynbacteraceae; Parvisynbacter; Parvisynbacter sp. HMT-348

LINKS: Ecology Home | HMT-0348: [Body Sites Data] [Taxon Description] | Life Page: Parvisynbacter sp. HMT-348

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Parvisynbacter sp. HMT-348

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.61	0.81	0.81	0.02	0.05	0	0.41	0.01	0.01	0.01	0.01	0.01	0	0.04	0	0.06	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0	0.02	0	0	0	0.03	0.01	0	0	0	0	0	0.04	0	0	0	0
90^thp	1.57	2.69	2.42	0.03	0.04	0	1.01	0.02	0.01	0.03	0.02	0.01	0	0.04	0	0.15	0	0
Stdev	0.96	1.45	1.26	0.04	0.27	0	0.88	0.01	0.01	0.09	0.04	0.01	0	0	0	0.16	0	0
Prev(%)	54.17	54.94	50.00	13.33	5.26	0	25.00	0	0	2.36	0	0	0	0	0	12.50	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.51	0.55	0	0.01	0	0.19	0.01	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.62	2.18	0	0.04	0.02	0.64	0.01	0	0	0
Stdev	1.36	1.12	0	0.04	0.01	0.43	0.05	0.01	0.01	0
Prev(%)	40.26	42.86	5.20	20.78	14.29	42.86	10.39	9.09	6.49	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.23	0.34	0.01	0.01	0	0.22	0	0	0	0	0.01	0.01	0.01	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.88	1.19	0	0.03	0	0.62	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.54	0.79	0.04	0.04	0	0.65	0.02	0	0	0.02	0.11	0.08	0.09	0.02	0	0	0	0
Prev(%)	41.72	42.38	7.69	19.86	0	43.08	9.52	0	0	3.67	7.18	3.12	4.02	2.77	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0.01	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0.04	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0.03	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	26.59	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.29	0.46	0.02	0.13	0.01	0.01	0.01	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.64	1.58	0.01	0.08	0.02	0.02	0.02	0	0	0
Stdev	0.79	0.78	0.14	0.51	0.04	0.03	0.01	0	0.01	0
Prev(%)	66.22	64.71	30.23	57.14	57.14	54.00	42.42	25.81	10.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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