Species: Porphyromonas catoniae (HMT-0283) Primary Body Site: Oral
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LINKS: Ecology Home
| HMT-0283: [Body Sites Data]
[Taxon Description]
| Life Page: Porphyromonas catoniae
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.80 | 0.51 | 0.12 | 0.03 | 0.05 | 0.01 | 0.37 | 0.01 | 0.01 | 0.01 | 0.01 | 0 | 0.01 | 0.02 | 0 | 0.01 | 0 | 0 |
| n | 24 | 395 | 24 | 15 | 323 | 1 | 8 | 7 | 22 | 423 | 65 | 23 | 30 | 1 | 4 | 8 | 94 | 375 |
| 10thp | 0.03 | 0.01 | 0 | 0 | 0 | 0.01 | 0.05 | 0 | 0 | 0 | 0 | 0 | 0 | 0.02 | 0 | 0 | 0 | 0 |
| 90thp | 2.27 | 1.30 | 0.42 | 0.07 | 0.10 | 0.01 | 0.84 | 0.02 | 0.03 | 0.03 | 0.02 | 0.01 | 0 | 0.02 | 0 | 0.02 | 0 | 0 |
| Stdev | 0.86 | 0.72 | 0.20 | 0.05 | 0.12 | 0 | 0.36 | 0.01 | 0.01 | 0.03 | 0.02 | 0.01 | 0.04 | 0 | 0 | 0.01 | 0.01 | 0 |
| Prev(%) | 75.00 | 67.85 | 20.83 | 6.67 | 7.12 | 0 | 62.50 | 14.29 | 4.55 | 6.62 | 0 | 0 | 3.33 | 0 | 0 | 12.50 | 0 | 0 |
Eren V1-V3 www.pnas.org
(Data from healthy subjects.)
No Notes
Eren V3-V5 www.pnas.org
(Data from healthy subjects.)
Notes:
Reads equally close to P. catoniae and P. sp. HMT 275, 277, and 284 were assigned one-fourth to each taxon.
Reads equally close to P. catoniae and P. sp. HMT 275, 277, and 284 were assigned one-fourth to each taxon.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.34 | 0.38 | 0.16 | 0.06 | 0.02 | 0.10 | 0.01 | 0.02 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.89 | 1.06 | 0.44 | 0.13 | 0.04 | 0.26 | 0.03 | 0.05 | 0.01 | 0 |
| Stdev | 0.47 | 0.46 | 0.35 | 0.17 | 0.04 | 0.12 | 0.03 | 0.06 | 0.01 | 0 |
| Prev(%) | 81.76 | 87.16 | 58.78 | 69.59 | 62.16 | 85.14 | 37.16 | 49.32 | 30.41 | 0.70 |
Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.80 | 0.77 | 0.10 | 0.06 | 0.03 | 0.18 | 0.01 | 0 | 0 | 0 | 0.01 | 0 | 0.01 | 0.02 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 2.30 | 2.40 | 0.15 | 0.14 | 0.07 | 0.53 | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Stdev | 1.28 | 1.26 | 0.47 | 0.14 | 0.16 | 0.34 | 0.13 | 0 | 0 | 0 | 0.12 | 0.04 | 0.09 | 0.11 | 0 | 0 | 0 | 0 |
| Prev(%) | 76.16 | 81.46 | 36.36 | 58.22 | 41.61 | 64.61 | 13.10 | 0 | 0 | 0 | 7.18 | 6.52 | 7.47 | 6.91 | 0 | 0 | 0 | 0 |
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
Notes:
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
| Avg (%) | 0.20 | 0.38 | 0.03 | 0.04 | 0.05 | 0.05 | 0.01 | 0.02 | 0.01 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.39 | 1.21 | 0.07 | 0.08 | 0.09 | 0.14 | 0.02 | 0.04 | 0.03 | 0 |
| Stdev | 0.56 | 0.83 | 0.07 | 0.14 | 0.13 | 0.10 | 0.02 | 0.04 | 0.02 | 0 |
| Prev(%) | 64.86 | 79.41 | 65.12 | 71.43 | 75.00 | 80.00 | 54.55 | 64.52 | 50.00 | 0 |
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.76 | 0.46 | 0.07 | 0.01 | 0.04 | 0 | 0.35 | 0 | 0 | 0 | 0 | 0 | 0.01 | 0 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 2.24 | 1.27 | 0.29 | 0.02 | 0.06 | 0 | 0.82 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Stdev | 0.89 | 0.75 | 0.15 | 0.04 | 0.14 | 0 | 0.39 | 0 | 0 | 0.01 | 0 | 0 | 0.03 | 0 | 0 | 0.01 | 0 | 0 |
| Prev(%) | 75.00 | 69.44 | 25.00 | 11.77 | 21.81 | 0 | 62.50 | 6.25 | 4.00 | 8.22 | 0 | 0 | 3.13 | 0 | 0 | 7.14 | 0 | 0.18 |
