HOMD ::Species:Porphyromonas sp. HMT-930

Species: Porphyromonas sp. HMT-930 (HMT-0930) Primary Body Site: Oral

Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; Porphyromonas sp. HMT-930

LINKS: Ecology Home | HMT-0930: [Body Sites Data] [Taxon Description] | Life Page: Porphyromonas sp. HMT-930

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
ND:Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Porphyromonas sp. HMT-930

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.03	0.03	2.47	0.58	0.21	0.11	0.10	0.15	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.06	0.10	7.99	0.97	0.70	0.41	0.18	0.27	0.03	0
Stdev	0.14	0.09	4.51	2.00	0.55	0.21	0.32	0.65	0.03	0
Prev(%)	29.87	29.87	50.65	42.86	46.75	40.26	31.17	41.56	19.48	1.30

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.06	0.03	2.87	0.51	0.15	0.22	0.12	0.12	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.18	0.06	9.60	0.83	0.36	0.56	0.31	0.40	0.04	0
Stdev	0.20	0.09	5.51	2.04	0.39	0.47	0.38	0.26	0.03	0
Prev(%)	26.35	29.05	58.11	48.65	43.92	56.76	33.78	44.59	21.62	0.70

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0.03	1.68	0.46	0.13	0.24	0.07	0.12	0	0.02	0.01	0	0.04	0.08	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.03	0.04	5.36	0.44	0.38	0.39	0.19	0.22	0	0.01	0	0	0.04	0.02	0	0	0	0
Stdev	0.12	0.21	3.65	1.89	0.37	1.18	0.24	0.47	0	0.09	0.08	0	0.21	0.61	0	0	0	0
Prev(%)	18.54	22.52	49.65	37.67	41.61	44.62	31.25	42.67	0	11.67	6.61	0	13.22	11.06	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.04	0.04	3.91	0.80	0.35	0.29	0.13	0.26	0.02	0	0.01	0	0	0.14	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.11	0.08	13.68	1.63	1.09	0.87	0.33	0.51	0.04	0	0	0	0	0.05	0	0	0	0
Stdev	0.17	0.19	7.89	2.73	0.89	0.69	0.44	0.89	0.08	0	0.12	0	0	1.28	0	0	0	0
Prev(%)	25.68	27.32	51.60	45.16	41.69	51.19	32.09	46.96	19.95	0	10.19	0	0	14.00	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0.05	0	0	0.01	0.05	0.02	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.05	0.01	0.01	0.02	0.03	0.05	0	0
Stdev	0.01	0	0.17	0.01	0.01	0.01	0.28	0.04	0.01	0
Prev(%)	10.81	2.94	27.91	20.00	21.43	28.00	30.30	32.26	5.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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