Species: Pseudoleptotrichia sp. HMT-215 (HMT-0215) Primary Body Site: Oral
Download Options
LINKS: Ecology Home
| HMT-0215: [Body Sites Data]
[Taxon Description]
| Life Page: Pseudoleptotrichia sp. HMT-215
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.09 | 0.12 | 0.05 | 0.03 | 0.10 | 0.07 | 0.15 | 0.90 | 0.69 | 0.55 | 0.02 | 0 | 0 | 0.01 | 0 | 0.01 | 0.01 | 0.01 |
| n | 24 | 395 | 24 | 15 | 323 | 1 | 8 | 7 | 22 | 423 | 65 | 23 | 30 | 1 | 4 | 8 | 94 | 375 |
| 10thp | 0.02 | 0.01 | 0 | 0 | 0.01 | 0.07 | 0.06 | 0.24 | 0.08 | 0.02 | 0 | 0 | 0 | 0.01 | 0 | 0 | 0 | 0 |
| 90thp | 0.20 | 0.27 | 0.11 | 0.04 | 0.24 | 0.07 | 0.24 | 1.62 | 1.61 | 1.36 | 0.02 | 0.01 | 0.01 | 0.01 | 0 | 0.02 | 0.01 | 0 |
| Stdev | 0.11 | 0.16 | 0.10 | 0.04 | 0.15 | 0 | 0.08 | 0.66 | 0.57 | 0.76 | 0.08 | 0.01 | 0 | 0 | 0 | 0.02 | 0.04 | 0.06 |
| Prev(%) | 37.50 | 55.44 | 12.50 | 33.33 | 23.53 | 100.00 | 25.00 | 100.00 | 77.27 | 85.11 | 3.08 | 0 | 0 | 0 | 0 | 12.50 | 1.06 | 0.53 |
Eren V1-V3 www.pnas.org
(Data from healthy subjects.)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.05 | 0.06 | 0.02 | 0.11 | 0.24 | 0.19 | 0.51 | 0.77 | 0.51 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.12 | 0.12 | 0.06 | 0.26 | 0.60 | 0.51 | 1.40 | 2.09 | 1.42 | 0 |
| Stdev | 0.11 | 0.15 | 0.04 | 0.17 | 0.33 | 0.27 | 0.80 | 1.08 | 0.80 | 0 |
| Prev(%) | 42.86 | 49.35 | 32.47 | 74.03 | 83.12 | 67.53 | 79.22 | 79.22 | 81.82 | 0 |
Eren V3-V5 www.pnas.org
(Data from healthy subjects.)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.04 | 0.06 | 0.03 | 0.11 | 0.18 | 0.20 | 0.37 | 0.58 | 0.40 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.10 | 0.14 | 0.06 | 0.34 | 0.52 | 0.45 | 0.96 | 1.41 | 1.05 | 0 |
| Stdev | 0.09 | 0.10 | 0.08 | 0.16 | 0.24 | 0.21 | 0.45 | 0.72 | 0.60 | 0 |
| Prev(%) | 41.89 | 56.76 | 27.03 | 68.92 | 72.30 | 80.41 | 79.73 | 82.43 | 83.78 | 0 |
Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.07 | 0.09 | 0.09 | 0.17 | 0.43 | 0.23 | 0.65 | 1.09 | 0.85 | 0.01 | 0.01 | 0.01 | 0.01 | 0.04 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.02 | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.17 | 0.22 | 0.14 | 0.44 | 0.85 | 0.60 | 1.87 | 2.90 | 2.19 | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Stdev | 0.18 | 0.22 | 0.43 | 0.28 | 0.87 | 0.36 | 0.95 | 1.52 | 1.37 | 0.05 | 0.13 | 0.06 | 0.04 | 0.24 | 0 | 0 | 0 | 0 |
| Prev(%) | 56.95 | 71.52 | 48.25 | 78.08 | 81.88 | 66.92 | 76.79 | 90.67 | 90.32 | 10.33 | 8.05 | 6.23 | 8.05 | 6.91 | 0 | 0 | 0 | 0 |
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.08 | 0.11 | 0.14 | 0.31 | 0.64 | 0.38 | 0.95 | 1.26 | 0.99 | 0 | 0.05 | 0 | 0.26 | 0.24 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.04 | 0.02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.20 | 0.26 | 0.35 | 0.80 | 1.68 | 0.92 | 2.66 | 2.99 | 2.44 | 0 | 0.03 | 0 | 0.67 | 0.46 | 0 | 0 | 0 | 0 |
| Stdev | 0.21 | 0.29 | 0.45 | 0.50 | 0.89 | 0.49 | 1.33 | 1.60 | 1.35 | 0 | 0.27 | 0 | 0.93 | 0.98 | 0 | 0 | 0 | 0 |
| Prev(%) | 54.81 | 68.54 | 44.44 | 75.43 | 81.59 | 82.74 | 80.69 | 92.70 | 91.24 | 0 | 14.01 | 0 | 28.28 | 28.67 | 0 | 0 | 0 | 0 |
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
| Avg (%) | 0.07 | 0.44 | 0.27 | 0.30 | 0.25 | 0.74 | 1.02 | 0.97 | 1.43 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0.01 | 0 | 0 | 0 | 0.02 | 0.03 | 0.01 | 0.01 | 0 |
| 90thp | 0.17 | 0.99 | 0.88 | 0.92 | 0.58 | 1.75 | 1.77 | 1.09 | 2.90 | 0 |
| Stdev | 0.15 | 1.23 | 0.45 | 0.51 | 0.33 | 1.16 | 2.40 | 2.22 | 3.63 | 0.01 |
| Prev(%) | 83.78 | 94.12 | 88.37 | 91.43 | 92.86 | 96.00 | 96.97 | 96.77 | 95.00 | 10.00 |
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes
