HOMD ::Family:Saccharimonadaceae

Family: Saccharimonadaceae

Full Lineage: Bacteria; Patescibacteria; Saccharimonadia; Saccharimonadales; Saccharimonadaceae
Lower rank member(s): [Genus:Saccharimonas]

LINKS: Ecology Home | Life Page: Saccharimonadaceae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Family: Saccharimonadaceae

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	2.47	2.16	6.80	0.35	0.20	0.01	0.74	0.03	0.04	0.04	0.19	0.01	0.08	0.13	0	0.01	0.04	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.12	0.03	0.51	0	0	0.01	0.27	0.02	0.01	0	0	0	0	0.13	0	0	0	0
90^thp	5.27	5.94	12.51	0.38	0.40	0.01	1.37	0.04	0.08	0.05	0.70	0.03	0.01	0.13	0	0.02	0.14	0
Stdev	3.13	2.97	7.99	1.06	0.66	0	1.13	0.01	0.06	0.39	0.39	0.02	0.44	0	0	0.01	0.08	0.01
Prev(%)	79.17	85.06	91.67	26.67	17.65	0	50.00	0	4.55	8.27	1.54	0	3.33	0	0	0	1.06	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.64	1.25	0.09	0.06	0.03	0.37	0.04	0.16	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	3.59	3.20	0.07	0.17	0.10	1.18	0.07	0.05	0.02	0
Stdev	4.03	2.46	0.36	0.13	0.09	0.64	0.15	1.17	0.03	0.01
Prev(%)	79.22	72.73	18.18	42.86	35.06	66.23	24.68	24.68	16.88	2.60

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.66	1.24	0.16	0.13	0.02	0.43	0.03	0.15	0	0.01	0.02	0.02	0.07	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	4.50	4.06	0.21	0.21	0.06	1.26	0.04	0.11	0	0	0	0	0.06	0	0	0	0	0
Stdev	3.05	1.94	0.83	0.60	0.06	0.73	0.26	0.81	0	0.09	0.20	0.15	0.35	0.07	0	0	0	0
Prev(%)	87.42	83.44	34.27	50.00	30.20	70.00	22.92	34.00	0	7.67	6.61	7.37	13.22	1.84	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.03	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.06	0.05	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.07	0.05	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	39.26	31.71	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	2.76	1.54	0.10	0.14	0.06	0.03	0.01	0.05	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0.01	0	0	0	0	0	0	0	0
90^thp	6.76	3.65	0.12	0.39	0.12	0.09	0.05	0.04	0.01	0
Stdev	4.52	3.24	0.37	0.36	0.14	0.06	0.02	0.22	0.01	0
Prev(%)	94.59	94.12	62.79	97.14	75.00	84.00	72.73	61.29	37.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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