HOMD ::Family:Tannerellaceae

Family: Tannerellaceae

Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae
Lower rank member(s): [Genus:Parabacteroides] [Genus:Tannerella]

LINKS: Ecology Home | Life Page: Tannerellaceae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Family: Tannerellaceae

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.59	0.34	2.52	0.03	0.09	0.01	0.13	0.29	0.46	0.14	0.30	0.01	0.01	0.18	0.01	0.23	0.14	6.15
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.02	0	0.16	0	0.01	0.01	0.05	0.02	0.02	0.01	0	0	0	0.18	0.01	0	0	1.36
90^thp	1.43	1.02	5.51	0.07	0.17	0.01	0.24	0.76	0.89	0.38	0.44	0.02	0.02	0.18	0.02	0.60	0.05	12.00
Stdev	0.76	0.57	2.37	0.05	0.23	0	0.09	0.66	0.72	0.31	1.04	0.01	0.03	0	0.01	0.58	0.85	5.25
Prev(%)	62.50	55.95	91.67	0	9.29	0	12.50	28.57	50.00	46.81	9.23	0	3.33	0	0	25.00	2.13	90.93

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.13	0.11	0	0.04	0.02	0.04	0.16	0.20	0.10	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.36	0.37	0	0.09	0.08	0.10	0.53	0.59	0.42	0
Stdev	0.34	0.24	0.01	0.12	0.04	0.19	0.39	0.47	0.21	0
Prev(%)	44.16	40.26	10.39	37.66	25.97	29.87	40.26	45.45	32.47	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.56	0.33	0.01	0.05	0.05	0.12	0.17	0.29	0.10	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.46	0.98	0.01	0.13	0.12	0.30	0.45	0.89	0.16	0
Stdev	0.91	0.46	0.04	0.09	0.11	0.14	0.37	0.54	0.37	0
Prev(%)	75.00	67.57	10.81	51.35	42.57	72.30	58.78	66.89	41.22	0.70

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.30	0.17	0	0.04	0.03	0.09	0.18	0.23	0.08	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.81	0.48	0	0.10	0.10	0.16	0.49	0.60	0.30	0	0	0	0	0	0	0	0	0
Stdev	0.52	0.37	0.02	0.12	0.05	0.22	0.42	0.45	0.17	0	0	0	0	0	0	0	0	0
Prev(%)	72.19	60.27	3.50	45.20	40.94	52.31	51.79	73.33	51.61	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.50	0.21	0.03	0.08	0.06	0.09	0.26	0.33	0.09	0	0.03	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.21	0.63	0.04	0.19	0.17	0.22	0.80	0.95	0.24	0	0	0	0	0	0	0	0	0
Stdev	0.83	0.42	0.18	0.19	0.13	0.13	0.53	0.63	0.22	0	0.20	0	0	0	0	0	0	0
Prev(%)	79.26	62.44	15.80	45.16	38.36	64.88	57.32	76.16	45.98	0	7.01	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.42	0.56	0.21	0.13	0.06	0.08	0.11	0.13	0.10	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.93	1.48	0.11	0.28	0.15	0.21	0.27	0.17	0.15	0
Stdev	1.13	0.83	0.95	0.28	0.14	0.14	0.25	0.41	0.33	0
Prev(%)	81.08	88.23	72.09	77.14	57.14	76.00	75.76	70.97	62.50	5.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.71	0.36	2.85	0.23	0.10	0	0.08	0.95	0.68	0.14	0.11	0	0	0	0	0.10	0.05	3.55
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0.19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.23
90^thp	2.28	1.08	6.23	0.08	0.23	0	0.19	4.11	1.48	0.42	0	0	0	0	0	0.12	0	7.52
Stdev	0.91	0.63	2.68	0.92	0.37	0	0.12	2.25	1.34	0.36	0.70	0	0.02	0	0	0.34	0.35	3.63
Prev(%)	75.00	66.16	100.00	17.65	34.04	0	75.00	43.75	64.00	54.23	8.11	4.17	3.13	0	0	14.29	4.04	91.45

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