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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Species: Treponema maltophilum (HMT-0664) Primary Body Site: Oral

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Full Lineage: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; Treponema maltophilum

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Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Available Datasets:
 HMP Mapping  Eren V1-V3  Eren V3-V5  HMP V1-V3  HMP V3-V5  HMP Metaphlan  Dewhirst 35x9
No Available Datasets for Species: Treponema maltophilum
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.140.040.580000.0100.04000000000
n2439524153231872242365233014894375
10thp000.01000000000000000
90thp0.450.121.1400.0100.020.010.16000000000
Stdev0.190.120.7900.0100.0100.08000000000
Prev(%)45.8323.5454.170000013.640.4700000000
Eren V1-V3 www.pnas.org (Data from healthy subjects.)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.120.0400000.010.0200
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp0000000000
90thp0.220.09000000.0800
Stdev0.370.1500.010.010.010.020.0900
Prev(%)35.0618.1807.792.609.099.0919.482.600
Eren V3-V5 www.pnas.org (Data from healthy subjects.)
Notes:
Reads equally close to T. maltophilum and T. sp. HMT 260 were assigned half to each taxon.




SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.090.030000.0100.0100
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp0000000000
90thp0.210.080000.0200.0400
Stdev0.210.0900.0200.010.010.0400
Prev(%)49.3231.082.039.464.7326.3510.1318.243.380
Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0600000000000000000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp000000000000000000
90thp0.1400000000000000000
Stdev0.1500000000000000000
Prev(%)44.3700000000000000000
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.1200000000000000000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp000000000000000000
90thp0.3300000000000000000
Stdev0.3000000000000000000
Prev(%)44.6900000000000000000
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.040.01000000.0100
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp0000000000
90thp0.070.0100.01000000
Stdev0.190.0100.010000.0300
Prev(%)32.4332.356.9817.143.5710.0018.1819.365.000
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.090.030.05000000.01000000000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp000000000000000000
90thp0.360.090.14000000000000000
Stdev0.150.110.07000000.05000000000
Prev(%)45.8327.0250.0000.270008.00000000000