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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Species: Treponema vincentii

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Full Lineage: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; Treponema vincentii

Lower rank member(s): [Subspecies:clade-029] [Subspecies:clade-432]
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Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Available Datasets:
 HMP Mapping  ND:Erenv1v3  ND:Erenv3v5  ND:HMPv1v3  ND:HMPv3v5  HMP Metaphlan  ND:Dewhirst35x9
No Available Datasets for Species: Treponema vincentii
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
Notes:
has subspecies


SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.910.151.0800.020.010.070.010.390.020000.010000
n2439524153231872242365233014894375
10thp000.08000.010.040000000.010000
90thp2.150.432.960.010.040.010.120.021.560.060.01000.010000
Stdev1.540.411.280.010.0400.040.010.650.060.010000000
Prev(%)58.3335.1983.3301.2400045.4514.6600000000
Eren V1-V3 www.pnas.org (Data from healthy subjects.)
No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)
No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
Notes:
has subspecies


SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.710.130.370000.020.010.47000000000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp000000000000000000
90thp1.900.361.010000.0501.64000000000
Stdev0.990.380.5800.0300.030.030.820.0200000000
Prev(%)66.6738.3879.1702.39037.506.2552.004.2200000000