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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2
Taxon Table | Genome Table

Porphyromonas pasteri (HMT-0279)

Bacteria;Bacteroidota;Bacteroidia;Bacteroidales;Porphyromonadaceae;Porphyromonas pasteri

Taxon Description:
Classification:
Bracketed letters indicate
that the taxonomic name at this
level has not been established.
  • Examples:
  • C1 – First Unnamed Class
  • O1 – First Unnamed Order
  • F2 – Second Unnamed Family
  • G3 – Third Unnamed Genus
Domain: Bacteria
Phylum: Bacteroidota
Class: Bacteroidia
Order: Bacteroidales
Family: Porphyromonadaceae
Genus: Porphyromonas
Species:pasteri
Bacterial Name: Porphyromonas pasteri
Naming Status: Named
Cultivation Status: Cultivated
Body Site (or Source):
  [View in Body Sites Table] 		Primary: Oral (Abundance: high)
Note: Saliva
Reason: Metagenomic mapping data, HMP (Torres-Morales et al. 2026)
Type/Reference Strain: F0030
Former Names or Synonyms:
Oral Clone CW034
Oral Clone DP023
Oral Strain TFI-F003
Phylum: Bacteroidetes
16S rRNA RefSeq Tree: View Taxon in RefSeq Tree
16S rRNA Reference Sequences:
     RefSeq-ID(s)
HMT-279_16S003845 Show Sequence
HMT-279_16S003849 Show Sequence
HMT-279_16S003903 Show Sequence
HMT-279_16S003914 Show Sequence
HMT-279_16S003999 Show Sequence
HMT-279_16S004036 Show Sequence
HMT-279_16S004448 Show Sequence
HMT-279_16S004454 Show Sequence
HMT-279_16S004474 Show Sequence
HMT-279_16S004478 Show Sequence
HMT-279_16S005809 Show Sequence
HMT-279_16S005835 Show Sequence
HMT-279_16S006689 Show Sequence

Download latest 16S rRNA reference gene sequences.
species/MarkWelch2016_Fig4B_256_ForCoryne_Porph_Strep_Aggr.png A cluster of Corynebacterium (magenta) topped by corncob structures composed of Streptococcus (green), Porphyromonas (blue), and Pasteurellaceae (orange). From Mark Welch et al. 2016
Number of
Genome Sequences:		 30 Open Genomes in Table
Pangenome(s): No Pangenomes Available.
Microbial Ecology: Abundance/Prevalence
Proteomics:
NCBI Taxon ID: 1583331 [Link to NCBI]
LPSN.dsmz.de: https://lpsn.dsmz.de/species/Porphyromonas-pasteri
PubMed Searches:
NCBI PubMed Link
NCBI (Entrez) Nucleotide Link
NCBI (Entrez) Protein Link
Phylogenetic Trees:
Genome Tree
Ribosomal Protein Tree
16S rRNA Gene Tree