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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

BAKTAGenome Explorer: Staphylococcus lugdunensis (GCA_024104435.1)

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BAKTA Annotations for GCA_024104435.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
40 2605218 2437 7 1 58
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Annotation Table [page:11]    |    Number of Records Found: 5120 [11 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 BAKTA
Gene		 BAKTA
GeneProduct
5001 JAHAVF010000022.1 GCA024104435_01296 tRNA open 956-1029 trnM tRNA-Met(cat)
5002 JAHAVF010000022.1 GCA024104435_01297 tRNA open 1058-1131 trnI tRNA-Ile2(cat)
5003 JAHAVF010000022.1 GCA024104435_01298 tRNA open 1141-1230 trnS tRNA-Ser(tga)
5004 JAHAVF010000022.1 GCA024104435_01299 tRNA open 1241-1316 trnD tRNA-Asp(gtc)
5005 JAHAVF010000022.1 GCA024104435_01300 tRNA open 1352-1444 trnS tRNA-Ser(tga)
5006 JAHAVF010000022.1 GCA024104435_01301 tRNA open 1456-1529 trnfM tRNA-fMet(cat)
5007 JAHAVF010000022.1 GCA024104435_01302 tRNA open 1540-1615 trnD tRNA-Asp(gtc)
5008 JAHAVF010000022.1 GCA024104435_01303 tRNA open 1630-1702 trnF tRNA-Phe(gaa)
5009 JAHAVF010000022.1 GCA024104435_01304 tRNA open 1713-1788 trnT tRNA-Thr(tgt)
5010 JAHAVF010000022.1 GCA024104435_01305 tRNA open 1792-1872 trnY tRNA-Tyr(gta)
5011 JAHAVF010000022.1 GCA024104435_01306 tRNA open 1884-1957 trnW tRNA-Trp(cca)
5012 JAHAVF010000022.1 GCA024104435_01307 tRNA open 1960-2032 trnH tRNA-His(gtg)
5013 JAHAVF010000022.1 GCA024104435_01308 tRNA open 2044-2115 trnQ tRNA-Gln(ttg)
5014 JAHAVF010000022.1 GCA024104435_01309 tRNA open 2121-2194 trnC tRNA-Cys(gca)
5015 JAHAVF010000022.1 GCA024104435_01310 tRNA open 2201-2275 trnG tRNA-Gly(tcc)
5016 JAHAVF010000022.1 GCA024104435_01311 tRNA open 2292-2366 trnG tRNA-Gly(tcc)
5017 JAHAVF010000022.1 GCA024104435_01312 tRNA open 2380-2454 trnG tRNA-Gly(tcc)
5018 JAHAVF010000022.1 GCA024104435_01313 tRNA open 2493-2576 trnL tRNA-Leu(caa)
5019 JAHAVF010000023.1 GCA024104435_01326 CDS open 119-562 _na     147_aa Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
5020 JAHAVF010000023.1 GCA024104435_01327 CDS open 597-1364 _na     255_aa Tyrosine-protein phosphatase
5021 JAHAVF010000023.1 GCA024104435_01328 CDS open 1365-2060 _na     231_aa non-specific protein-tyrosine kinase
5022 JAHAVF010000023.1 GCA024104435_01329 CDS open 2072-2734 _na     220_aa capA Capsule biosynthesis protein CapA
5023 JAHAVF010000023.1 GCA024104435_01330 CDS open 3001-3102 _na     33_aa SE2200 family small protein
5024 JAHAVF010000023.1 GCA024104435_01331 CDS open 3346-3972 _na     208_aa FMN dependent NADH:quinone oxidoreductase
5025 JAHAVF010000023.1 GCA024104435_01332 CDS open 4004-4846 _na     280_aa Phage-related replication protein
5026 JAHAVF010000023.1 GCA024104435_01333 CDS open 5021-6160 _na     379_aa capA Capsule biosynthesis protein CapA
5027 JAHAVF010000023.1 GCA024104435_01334 CDS open 6531-7292 _na     253_aa Tributyrin esterase
5028 JAHAVF010000023.1 GCA024104435_01335 CDS open 7586-8824 _na     412_aa arcA arginine deiminase
5029 JAHAVF010000023.1 GCA024104435_01336 CDS open 8998-9138 _na     46_aa Transposase
5030 JAHAVF010000023.1 GCA024104435_01337 CDS open 9195-9575 _na     126_aa blaI penicillinase repressor BlaI
5031 JAHAVF010000023.1 GCA024104435_01338 CDS open 9565-11322 _na     585_aa blaR1 beta-lactam sensor/signal transducer BlaR1
5032 JAHAVF010000023.1 GCA024104435_01339 CDS open 11429-12274 _na     281_aa blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ
5033 JAHAVF010000023.1 GCA024104435_01340 CDS open 12583-12993 _na     136_aa YolD-like family protein
5034 JAHAVF010000023.1 GCA024104435_01341 CDS open 13047-13934 _na     295_aa Transmembrane protein
5035 JAHAVF010000023.1 GCA024104435_01326 gene open 119-562
5036 JAHAVF010000023.1 GCA024104435_01327 gene open 597-1364
5037 JAHAVF010000023.1 GCA024104435_01328 gene open 1365-2060
5038 JAHAVF010000023.1 GCA024104435_01329 gene open 2072-2734 capA
5039 JAHAVF010000023.1 GCA024104435_01330 gene open 3001-3102
5040 JAHAVF010000023.1 GCA024104435_01331 gene open 3346-3972
5041 JAHAVF010000023.1 GCA024104435_01332 gene open 4004-4846
5042 JAHAVF010000023.1 GCA024104435_01333 gene open 5021-6160 capA
5043 JAHAVF010000023.1 GCA024104435_01334 gene open 6531-7292
5044 JAHAVF010000023.1 GCA024104435_01335 gene open 7586-8824 arcA
5045 JAHAVF010000023.1 GCA024104435_01336 gene open 8998-9138
5046 JAHAVF010000023.1 GCA024104435_01337 gene open 9195-9575 blaI
5047 JAHAVF010000023.1 GCA024104435_01338 gene open 9565-11322 blaR1
5048 JAHAVF010000023.1 GCA024104435_01339 gene open 11429-12274 blaZ
5049 JAHAVF010000023.1 GCA024104435_01340 gene open 12583-12993
5050 JAHAVF010000023.1 GCA024104435_01341 gene open 13047-13934
5051 JAHAVF010000024.1 oriT open 9091-9328
5052 JAHAVF010000024.1 rep_origin open 11647-12378
5053 JAHAVF010000024.1 GCA024104435_01345 gene open 7087-7176 fstAT
5054 JAHAVF010000024.1 GCA024104435_01345 ncRNA open 7087-7176 Fst antitoxin sRNA
5055 JAHAVF010000024.1 GCA024104435_01342 CDS open 911-1513 _na     200_aa spoIVCA Recombinase
5056 JAHAVF010000024.1 GCA024104435_01343 CDS open 2148-6188 _na     1346_aa Eco57I restriction-modification methylase domain-containing protein
5057 JAHAVF010000024.1 GCA024104435_01344 CDS open 6169-6918 _na     249_aa methylase
5058 JAHAVF010000024.1 GCA024104435_01346 CDS open 7527-7976 _na     149_aa DUF523 domain-containing protein
5059 JAHAVF010000024.1 GCA024104435_01347 CDS open 8186-8860 _na     224_aa tnp IS6 family IS257R2 transposase
5060 JAHAVF010000024.1 GCA024104435_01348 CDS open 9299-9682 _na     127_aa Mobilization protein
5061 JAHAVF010000024.1 GCA024104435_01349 CDS open 9664-9873 _na     69_aa Mobilization protein
5062 JAHAVF010000024.1 GCA024104435_01350 CDS open 9860-10870 _na     336_aa MobA/VirD2-like nuclease domain-containing protein
5063 JAHAVF010000024.1 GCA024104435_01351 CDS open 10908-11378 _na     156_aa Mobilization protein
5064 JAHAVF010000024.1 GCA024104435_01352 CDS open 11485-11646 _na     53_aa Mobilization protein
5065 JAHAVF010000024.1 GCA024104435_01353 CDS open 12379-13242 _na     287_aa Replication protein
5066 JAHAVF010000024.1 GCA024104435_01342 gene open 911-1513 spoIVCA
5067 JAHAVF010000024.1 GCA024104435_01343 gene open 2148-6188
5068 JAHAVF010000024.1 GCA024104435_01344 gene open 6169-6918
5069 JAHAVF010000024.1 GCA024104435_01346 gene open 7527-7976
5070 JAHAVF010000024.1 GCA024104435_01347 gene open 8186-8860 tnp
5071 JAHAVF010000024.1 GCA024104435_01348 gene open 9299-9682
5072 JAHAVF010000024.1 GCA024104435_01349 gene open 9664-9873
5073 JAHAVF010000024.1 GCA024104435_01350 gene open 9860-10870
5074 JAHAVF010000024.1 GCA024104435_01351 gene open 10908-11378
5075 JAHAVF010000024.1 GCA024104435_01352 gene open 11485-11646
5076 JAHAVF010000024.1 GCA024104435_01353 gene open 12379-13242
5077 JAHAVF010000025.1 GCA024104435_01354 CDS open 277-1983 _na     568_aa betA choline dehydrogenase
5078 JAHAVF010000025.1 GCA024104435_01355 CDS open 2075-3565 _na     496_aa betB betaine-aldehyde dehydrogenase
5079 JAHAVF010000025.1 GCA024104435_01356 CDS open 3933-4493 _na     186_aa cudC choline uptake/conversion transcriptional regulator CudC
5080 JAHAVF010000025.1 GCA024104435_01354 gene open 277-1983 betA
5081 JAHAVF010000025.1 GCA024104435_01355 gene open 2075-3565 betB
5082 JAHAVF010000025.1 GCA024104435_01356 gene open 3933-4493 cudC
5083 JAHAVF010000027.1 GCA024104435_01357 CDS open 263-463 _na     66_aa Replication initiator A N-terminal domain-containing protein
5084 JAHAVF010000027.1 GCA024104435_01358 CDS open 892-1659 _na     255_aa DUF536 domain-containing protein
5085 JAHAVF010000027.1 GCA024104435_01359 CDS open 2423-2563 _na     46_aa helix-turn-helix domain-containing protein
5086 JAHAVF010000027.1 GCA024104435_01360 CDS open 2668-2766 _na     32_aa hypothetical protein
5087 JAHAVF010000027.1 GCA024104435_01357 gene open 263-463
5088 JAHAVF010000027.1 GCA024104435_01358 gene open 892-1659
5089 JAHAVF010000027.1 GCA024104435_01359 gene open 2423-2563
5090 JAHAVF010000027.1 GCA024104435_01360 gene open 2668-2766
5091 JAHAVF010000028.1 GCA024104435_01361 CDS open 279-1094 _na     271_aa Replication protein
5092 JAHAVF010000028.1 GCA024104435_01362 CDS open 1627-1848 _na     73_aa Phage protein
5093 JAHAVF010000028.1 GCA024104435_01363 CDS open 2066-2389 _na     107_aa qacC quaternary ammonium compound efflux SMR transporter QacC
5094 JAHAVF010000028.1 GCA024104435_01364 CDS open 2697-2927 _na     76_aa hypothetical protein
5095 JAHAVF010000028.1 GCA024104435_01361 gene open 279-1094
5096 JAHAVF010000028.1 GCA024104435_01362 gene open 1627-1848
5097 JAHAVF010000028.1 GCA024104435_01363 gene open 2066-2389 qacC
5098 JAHAVF010000028.1 GCA024104435_01364 gene open 2697-2927
5099 JAHAVF010000029.1 GCA024104435_01365 gene open 48-1955 rrl
5100 JAHAVF010000029.1 GCA024104435_01365 rRNA open 48-1955 rrl 23S ribosomal RNA
5101 JAHAVF010000030.1 GCA024104435_01710 CDS open 80-1519 _na     479_aa aac(6')-Ie bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia
5102 JAHAVF010000030.1 GCA024104435_01711 CDS open 1520-1912 _na     130_aa rimI Cyclic di-GMP phosphodiesterase Gmr
5103 JAHAVF010000030.1 GCA024104435_01710 gene open 80-1519 aac(6')-Ie
5104 JAHAVF010000030.1 GCA024104435_01711 gene open 1520-1912 rimI
5105 JAHAVF010000032.1 GCA024104435_01713 gene open 144-241 rli23
5106 JAHAVF010000032.1 GCA024104435_01713 ncRNA open 144-241 Listeria snRNA rli23
5107 JAHAVF010000032.1 GCA024104435_01712 CDS open 45-887 _na     280_aa tnp IS3 family ISSau4 transposase ORF B
5108 JAHAVF010000032.1 GCA024104435_01714 CDS open 872-1186 _na     104_aa tnp IS3 family ISSau4 transposase ORF A
5109 JAHAVF010000032.1 GCA024104435_01712 gene open 45-887 tnp
5110 JAHAVF010000032.1 GCA024104435_01714 gene open 872-1186 tnp
5111 JAHAVF010000033.1 GCA024104435_01715 CDS open 261-725 _na     154_aa xRE Transcriptional regulator
5112 JAHAVF010000033.1 GCA024104435_01715 gene open 261-725 xRE
5113 JAHAVF010000035.1 GCA024104435_01716 gene open 1-936 rrs
5114 JAHAVF010000035.1 GCA024104435_01716 rRNA open 1-936 rrs 16S ribosomal RNA
5115 JAHAVF010000036.1 GCA024104435_01717 gene open 811-925 rrf
5116 JAHAVF010000036.1 GCA024104435_01717 rRNA open 811-925 rrf 5S ribosomal RNA
5117 JAHAVF010000038.1 GCA024104435_01718 gene open 149-225 trnI
5118 JAHAVF010000038.1 GCA024104435_01718 tRNA open 149-225 trnI tRNA-Ile(gat)
5119 JAHAVF010000039.1 GCA024104435_01719 gene open 1-520 rrs
5120 JAHAVF010000039.1 GCA024104435_01719 rRNA open 1-520 rrs 16S ribosomal RNA