PROKKAGenome Explorer: Streptococcus pseudopneumoniae (GCA_001336595.1)
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PROKKA Annotations for GCA_001336595.1
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Notes: 1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
| Region | Protein-ID | Type | Genome Viewer |
Range (bp) |
Show Sequences (length) NA / AA |
PROKKA Gene |
PROKKA GeneProduct |
|
|---|---|---|---|---|---|---|---|---|
| 2001 | CGVP01000041.1 | GCA_001336595.1_02001 | CDS | open | 11117-11569 | 453_na 150_aa | hypothetical protein | |
| 2002 | CGVP01000042.1 | GCA_001336595.1_02002 | CDS | open | 916-4191 | 3276_na 1091_aa | rexB | ATP-dependent helicasedeoxyribonuclease subunit B |
| 2003 | CGVP01000042.1 | GCA_001336595.1_02003 | CDS | open | 4188-7838 | 3651_na 1216_aa | addA | ATP-dependent helicasenuclease subunit A |
| 2004 | CGVP01000042.1 | GCA_001336595.1_02004 | CDS | open | 8053-9231 | 1179_na 392_aa | hypothetical protein | |
| 2005 | CGVP01000043.1 | GCA_001336595.1_02005 | CDS | open | 325-561 | 237_na 78_aa | hypothetical protein | |
| 2006 | CGVP01000043.1 | GCA_001336595.1_02006 | CDS | open | 750-2078 | 1329_na 442_aa | purA | Adenylosuccinate synthetase |
| 2007 | CGVP01000043.1 | misc_RNA | open | 2125-2222 | csRNA | |||
| 2008 | CGVP01000043.1 | GCA_001336595.1_02008 | CDS | open | 2279-2746 | 468_na 155_aa | tadA_1 | tRNA-specific adenosine deaminase |
| 2009 | CGVP01000043.1 | misc_RNA | open | 2779-2876 | Bacteria_small_SRP | |||
| 2010 | CGVP01000043.1 | GCA_001336595.1_02010 | CDS | open | 2933-3376 | 444_na 147_aa | dut | Deoxyuridine 5-triphosphate nucleotidohydrolase |
| 2011 | CGVP01000043.1 | GCA_001336595.1_02011 | CDS | open | 3336-3893 | 558_na 185_aa | hypothetical protein | |
| 2012 | CGVP01000043.1 | GCA_001336595.1_02012 | CDS | open | 4045-5268 | 1224_na 407_aa | radA | DNA repair protein RadA |
| 2013 | CGVP01000043.1 | GCA_001336595.1_02013 | CDS | open | 5341-5838 | 498_na 165_aa | mtcA1 | Beta-carbonic anhydrase 1 |
| 2014 | CGVP01000043.1 | GCA_001336595.1_02014 | CDS | open | 5863-6678 | 816_na 271_aa | hypothetical protein | |
| 2015 | CGVP01000043.1 | GCA_001336595.1_02015 | CDS | open | 6823-7791 | 969_na 322_aa | prs | Ribose-phosphate pyrophosphokinase |
| 2016 | CGVP01000043.1 | GCA_001336595.1_02016 | CDS | open | 8032-8418 | 387_na 128_aa | IS630 family transposase IS630-Spn1 | |
| 2017 | CGVP01000043.1 | GCA_001336595.1_02017 | CDS | open | 8366-8734 | 369_na 122_aa | IS630 family transposase IS630-Spn1 | |
| 2018 | CGVP01000043.1 | GCA_001336595.1_02018 | CDS | open | 8808-8981 | 174_na 57_aa | hypothetical protein | |
| 2019 | CGVP01000044.1 | GCA_001336595.1_02019 | CDS | open | 826-1443 | 618_na 205_aa | kdpC | Potassium-transporting ATPase KdpC subunit |
| 2020 | CGVP01000044.1 | GCA_001336595.1_02020 | CDS | open | 1568-3637 | 2070_na 689_aa | kdpB | Potassium-transporting ATPase ATP-binding subunit |
| 2021 | CGVP01000044.1 | GCA_001336595.1_02021 | CDS | open | 3646-5391 | 1746_na 581_aa | kdpA | Potassium-transporting ATPase potassium-binding subunit |
| 2022 | CGVP01000044.1 | GCA_001336595.1_02022 | CDS | open | 5781-6506 | 726_na 241_aa | kdpE | Transcriptional regulatory protein KdpE |
| 2023 | CGVP01000044.1 | GCA_001336595.1_02023 | CDS | open | 6496-9129 | 2634_na 877_aa | kdpD | Sensor protein KdpD |
| 2024 | CGVP01000045.1 | GCA_001336595.1_02024 | CDS | open | 111-407 | 297_na 98_aa | bglH_2 | Aryl-phospho-beta-D-glucosidase BglH |
| 2025 | CGVP01000045.1 | GCA_001336595.1_02025 | CDS | open | 528-1472 | 945_na 314_aa | gmuF | putative mannose-6-phosphate isomerase GmuF |
| 2026 | CGVP01000045.1 | GCA_001336595.1_02026 | CDS | open | 1513-2853 | 1341_na 446_aa | hypothetical protein | |
| 2027 | CGVP01000045.1 | GCA_001336595.1_02027 | CDS | open | 3193-3933 | 741_na 246_aa | mta | HTH-type transcriptional activator mta |
| 2028 | CGVP01000045.1 | GCA_001336595.1_02028 | CDS | open | 3976-5106 | 1131_na 376_aa | putative protein | |
| 2029 | CGVP01000045.1 | GCA_001336595.1_02029 | CDS | open | 5210-6055 | 846_na 281_aa | DegV domain-containing protein | |
| 2030 | CGVP01000045.1 | GCA_001336595.1_02030 | CDS | open | 6180-6737 | 558_na 185_aa | hypothetical protein | |
| 2031 | CGVP01000045.1 | GCA_001336595.1_02031 | CDS | open | 6756-7223 | 468_na 155_aa | tadA_2 | tRNA-specific adenosine deaminase |
| 2032 | CGVP01000045.1 | GCA_001336595.1_02032 | CDS | open | 7312-7941 | 630_na 209_aa | upp | Uracil phosphoribosyltransferase |
| 2033 | CGVP01000045.1 | GCA_001336595.1_02033 | CDS | open | 8115-8705 | 591_na 196_aa | clpP_2 | ATP-dependent Clp protease proteolytic subunit |
| 2034 | CGVP01000046.1 | GCA_001336595.1_02034 | CDS | open | 768-2228 | 1461_na 486_aa | speA | Arginine decarboxylase |
| 2035 | CGVP01000046.1 | GCA_001336595.1_02035 | CDS | open | 2229-3089 | 861_na 286_aa | speE | Polyamine aminopropyltransferase |
| 2036 | CGVP01000046.1 | GCA_001336595.1_02036 | CDS | open | 3086-4345 | 1260_na 419_aa | Carboxynorspermidine synthase | |
| 2037 | CGVP01000046.1 | GCA_001336595.1_02037 | CDS | open | 4345-5472 | 1128_na 375_aa | nspC | Carboxynorspermidinecarboxyspermidine decarboxylase |
| 2038 | CGVP01000046.1 | GCA_001336595.1_02038 | CDS | open | 5469-6554 | 1086_na 361_aa | aguA | Agmatine deiminase |
| 2039 | CGVP01000046.1 | GCA_001336595.1_02039 | CDS | open | 6564-7439 | 876_na 291_aa | N-carbamoyl-D-amino acid hydrolase | |
| 2040 | CGVP01000046.1 | GCA_001336595.1_02040 | CDS | open | 7585-8055 | 471_na 156_aa | IS5 family transposase ISSpn7 | |
| 2041 | CGVP01000047.1 | GCA_001336595.1_02041 | CDS | open | 106-1056 | 951_na 316_aa | hypothetical protein | |
| 2042 | CGVP01000047.1 | GCA_001336595.1_02042 | CDS | open | 1430-3421 | 1992_na 663_aa | bceB | Bacitracin export permease protein BceB |
| 2043 | CGVP01000047.1 | GCA_001336595.1_02043 | CDS | open | 3423-4181 | 759_na 252_aa | bceA_2 | Bacitracin export ATP-binding protein BceA |
| 2044 | CGVP01000047.1 | GCA_001336595.1_02044 | CDS | open | 4196-4306 | 111_na 36_aa | hypothetical protein | |
| 2045 | CGVP01000047.1 | GCA_001336595.1_02045 | CDS | open | 4609-4806 | 198_na 65_aa | hypothetical protein | |
| 2046 | CGVP01000047.1 | misc_RNA | open | 4876-4938 | Spd-sr07 | |||
| 2047 | CGVP01000047.1 | GCA_001336595.1_02047 | CDS | open | 4944-5216 | 273_na 90_aa | hypothetical protein | |
| 2048 | CGVP01000047.1 | GCA_001336595.1_02048 | CDS | open | 5275-5724 | 450_na 149_aa | Protein SprT-like protein | |
| 2049 | CGVP01000047.1 | GCA_001336595.1_02049 | CDS | open | 5711-7867 | 2157_na 718_aa | yhgF | Protein YhgF |
| 2050 | CGVP01000047.1 | GCA_001336595.1_02050 | CDS | open | 7942-8208 | 267_na 88_aa | hypothetical protein | |
| 2051 | CGVP01000048.1 | GCA_001336595.1_02051 | CDS | open | 335-529 | 195_na 64_aa | hypothetical protein | |
| 2052 | CGVP01000048.1 | GCA_001336595.1_02052 | CDS | open | 545-1087 | 543_na 180_aa | hypothetical protein | |
| 2053 | CGVP01000048.1 | GCA_001336595.1_02053 | CDS | open | 1098-1340 | 243_na 80_aa | hypothetical protein | |
| 2054 | CGVP01000048.1 | GCA_001336595.1_02054 | CDS | open | 1351-1677 | 327_na 108_aa | hypothetical protein | |
| 2055 | CGVP01000048.1 | GCA_001336595.1_02055 | CDS | open | 1704-2105 | 402_na 133_aa | hypothetical protein | |
| 2056 | CGVP01000048.1 | GCA_001336595.1_02056 | CDS | open | 2279-2755 | 477_na 158_aa | bsaA | Glutathione peroxidase BsaA |
| 2057 | CGVP01000048.1 | misc_RNA | open | 2831-2925 | SpF11_sRNA | |||
| 2058 | CGVP01000048.1 | GCA_001336595.1_02058 | CDS | open | 2977-5190 | 2214_na 737_aa | hypothetical protein | |
| 2059 | CGVP01000048.1 | misc_RNA | open | 5222-5278 | SpF10_sRNA | |||
| 2060 | CGVP01000048.1 | GCA_001336595.1_02060 | CDS | open | 5466-5591 | 126_na 41_aa | hypothetical protein | |
| 2061 | CGVP01000048.1 | GCA_001336595.1_02061 | CDS | open | 5591-5767 | 177_na 58_aa | hypothetical protein | |
| 2062 | CGVP01000048.1 | GCA_001336595.1_02062 | CDS | open | 6172-7380 | 1209_na 402_aa | hypothetical protein | |
| 2063 | CGVP01000049.1 | tRNA | open | 9-84 | tRNA-Ile(gat) | |||
| 2064 | CGVP01000049.1 | tRNA | open | 166-255 | tRNA-Ser(tga) | |||
| 2065 | CGVP01000049.1 | tRNA | open | 266-339 | tRNA-Met(cat) | |||
| 2066 | CGVP01000049.1 | tRNA | open | 343-415 | tRNA-Phe(gaa) | |||
| 2067 | CGVP01000049.1 | tRNA | open | 427-509 | tRNA-Tyr(gta) | |||
| 2068 | CGVP01000049.1 | tRNA | open | 512-584 | tRNA-Trp(cca) | |||
| 2069 | CGVP01000049.1 | tRNA | open | 597-671 | tRNA-His(gtg) | |||
| 2070 | CGVP01000049.1 | tRNA | open | 683-756 | tRNA-Gln(ttg) | |||
| 2071 | CGVP01000049.1 | tRNA | open | 764-849 | tRNA-Leu(caa) | |||
| 2072 | CGVP01000049.1 | GCA_001336595.1_02072 | CDS | open | 955-2232 | 1278_na 425_aa | hypothetical protein | |
| 2073 | CGVP01000049.1 | GCA_001336595.1_02073 | CDS | open | 2309-3793 | 1485_na 494_aa | thrC | Threonine synthase |
| 2074 | CGVP01000049.1 | GCA_001336595.1_02074 | CDS | open | 3854-5134 | 1281_na 426_aa | yeeO | putative FMNFAD exporter YeeO |
| 2075 | CGVP01000049.1 | GCA_001336595.1_02075 | CDS | open | 5138-5761 | 624_na 207_aa | gph_3 | Phosphoglycolate phosphatase |
| 2076 | CGVP01000049.1 | GCA_001336595.1_02076 | CDS | open | 5924-7102 | 1179_na 392_aa | hypothetical protein | |
| 2077 | CGVP01000050.1 | GCA_001336595.1_02077 | CDS | open | 544-2523 | 1980_na 659_aa | amiA | Oligopeptide-binding protein AmiA |
| 2078 | CGVP01000050.1 | GCA_001336595.1_02078 | CDS | open | 2590-4086 | 1497_na 498_aa | hypothetical protein | |
| 2079 | CGVP01000050.1 | GCA_001336595.1_02079 | CDS | open | 4086-5012 | 927_na 308_aa | oppC | Oligopeptide transport system permease protein OppC |
| 2080 | CGVP01000050.1 | GCA_001336595.1_02080 | CDS | open | 5021-6088 | 1068_na 355_aa | oppD | Oligopeptide transport ATP-binding protein OppD |
| 2081 | CGVP01000050.1 | GCA_001336595.1_02081 | CDS | open | 6099-7025 | 927_na 308_aa | oppF | Oligopeptide transport ATP-binding protein OppF |
| 2082 | CGVP01000051.1 | GCA_001336595.1_02082 | CDS | open | 128-2560 | 2433_na 810_aa | clpC_2 | ATP-dependent Clp protease ATP-binding subunit ClpC |
| 2083 | CGVP01000051.1 | GCA_001336595.1_02083 | CDS | open | 2562-3020 | 459_na 152_aa | ctsR | Transcriptional regulator CtsR |
| 2084 | CGVP01000051.1 | GCA_001336595.1_02084 | CDS | open | 3143-3868 | 726_na 241_aa | cysA_2 | Sulfatethiosulfate import ATP-binding protein CysA |
| 2085 | CGVP01000051.1 | GCA_001336595.1_02085 | CDS | open | 3868-4875 | 1008_na 335_aa | thiY | Formylaminopyrimidine-binding protein |
| 2086 | CGVP01000051.1 | GCA_001336595.1_02086 | CDS | open | 4914-5672 | 759_na 252_aa | ribX | Riboflavin transport system permease protein RibX |
| 2087 | CGVP01000051.1 | GCA_001336595.1_02087 | CDS | open | 5635-5925 | 291_na 96_aa | hypothetical protein | |
| 2088 | CGVP01000051.1 | misc_RNA | open | 5996-6098 | TPP | |||
| 2089 | CGVP01000051.1 | misc_RNA | open | 6145-6210 | Intron_gpII | |||
| 2090 | CGVP01000051.1 | GCA_001336595.1_02090 | CDS | open | 6210-6641 | 432_na 143_aa | hypothetical protein | |
| 2091 | CGVP01000052.1 | GCA_001336595.1_02091 | CDS | open | 123-548 | 426_na 141_aa | hypothetical protein | |
| 2092 | CGVP01000052.1 | GCA_001336595.1_02092 | CDS | open | 559-921 | 363_na 120_aa | hypothetical protein | |
| 2093 | CGVP01000052.1 | GCA_001336595.1_02093 | CDS | open | 1033-1548 | 516_na 171_aa | pcp_2 | Pyrrolidone-carboxylate peptidase |
| 2094 | CGVP01000052.1 | GCA_001336595.1_02094 | CDS | open | 1795-2673 | 879_na 292_aa | hypothetical protein | |
| 2095 | CGVP01000052.1 | GCA_001336595.1_02095 | CDS | open | 2790-3932 | 1143_na 380_aa | tgt | Queuine tRNA-ribosyltransferase |
| 2096 | CGVP01000052.1 | GCA_001336595.1_02096 | CDS | open | 4033-5850 | 1818_na 605_aa | oatA | O-acetyltransferase OatA |
| 2097 | CGVP01000053.1 | GCA_001336595.1_02097 | CDS | open | 171-1385 | 1215_na 404_aa | alaA | Glutamate-pyruvate aminotransferase AlaA |
| 2098 | CGVP01000053.1 | GCA_001336595.1_02098 | CDS | open | 1530-1664 | 135_na 44_aa | rpmH | 50S ribosomal protein L34 |
| 2099 | CGVP01000053.1 | GCA_001336595.1_02099 | CDS | open | 2249-4216 | 1968_na 655_aa | hypothetical protein | |
| 2100 | CGVP01000054.1 | GCA_001336595.1_02100 | CDS | open | 92-370 | 279_na 92_aa | hypothetical protein | |
| 2101 | CGVP01000054.1 | GCA_001336595.1_02101 | CDS | open | 345-551 | 207_na 68_aa | hypothetical protein | |
| 2102 | CGVP01000054.1 | GCA_001336595.1_02102 | CDS | open | 605-955 | 351_na 116_aa | hypothetical protein | |
| 2103 | CGVP01000054.1 | GCA_001336595.1_02103 | CDS | open | 936-1121 | 186_na 61_aa | hypothetical protein | |
| 2104 | CGVP01000054.1 | GCA_001336595.1_02104 | CDS | open | 1229-1984 | 756_na 251_aa | hypothetical protein | |
| 2105 | CGVP01000054.1 | GCA_001336595.1_02105 | CDS | open | 1986-2618 | 633_na 210_aa | yknY_4 | putative ABC transporter ATP-binding protein YknY |
| 2106 | CGVP01000054.1 | GCA_001336595.1_02106 | CDS | open | 2759-3037 | 279_na 92_aa | hypothetical protein | |
| 2107 | CGVP01000054.1 | GCA_001336595.1_02107 | CDS | open | 3105-4022 | 918_na 305_aa | hypothetical protein | |
| 2108 | CGVP01000055.1 | GCA_001336595.1_02108 | CDS | open | 235-528 | 294_na 97_aa | hypothetical protein | |
| 2109 | CGVP01000055.1 | GCA_001336595.1_02109 | CDS | open | 535-2736 | 2202_na 733_aa | hypothetical protein | |
| 2110 | CGVP01000055.1 | GCA_001336595.1_02110 | CDS | open | 2741-3382 | 642_na 213_aa | yxdL | ABC transporter ATP-binding protein YxdL |
| 2111 | CGVP01000055.1 | GCA_001336595.1_02111 | CDS | open | 3511-3807 | 297_na 98_aa | hypothetical protein | |
| 2112 | CGVP01000055.1 | GCA_001336595.1_02112 | CDS | open | 3912-4760 | 849_na 282_aa | hypothetical protein | |
| 2113 | CGVP01000056.1 | GCA_001336595.1_02113 | CDS | open | 213-4043 | 3831_na 1276_aa | iga | Immunoglobulin A1 protease |
| 2114 | CGVP01000057.1 | GCA_001336595.1_02114 | CDS | open | 64-417 | 354_na 117_aa | csd | putative cysteine desulfurase |
| 2115 | CGVP01000057.1 | GCA_001336595.1_02115 | CDS | open | 1095-2474 | 1380_na 459_aa | putative NADH oxidase | |
| 2116 | CGVP01000057.1 | GCA_001336595.1_02116 | CDS | open | 2780-3265 | 486_na 161_aa | apbE_1 | FAD:protein FMN transferase |
| 2117 | CGVP01000057.1 | GCA_001336595.1_02117 | CDS | open | 3237-3524 | 288_na 95_aa | apbE_2 | FAD:protein FMN transferase |
| 2118 | CGVP01000058.1 | misc_RNA | open | 31-237 | group-II-D1D4-3 | |||
| 2119 | CGVP01000058.1 | GCA_001336595.1_02119 | CDS | open | 455-1759 | 1305_na 434_aa | eno | Enolase |
| 2120 | CGVP01000058.1 | GCA_001336595.1_02120 | CDS | open | 1922-2368 | 447_na 148_aa | hypothetical protein | |
| 2121 | CGVP01000058.1 | GCA_001336595.1_02121 | CDS | open | 2365-3462 | 1098_na 365_aa | glxK | Glycerate kinase |
| 2122 | CGVP01000059.1 | GCA_001336595.1_02122 | CDS | open | 706-1575 | 870_na 289_aa | gla | Glycerol facilitator-aquaporin gla |
| 2123 | CGVP01000059.1 | GCA_001336595.1_02123 | CDS | open | 1798-3069 | 1272_na 423_aa | hypothetical protein | |
| 2124 | CGVP01000060.1 | GCA_001336595.1_02124 | CDS | open | 938-1180 | 243_na 80_aa | hypothetical protein | |
| 2125 | CGVP01000061.1 | GCA_001336595.1_02125 | CDS | open | 446-751 | 306_na 101_aa | hypothetical protein | |
| 2126 | CGVP01000061.1 | GCA_001336595.1_02126 | CDS | open | 1084-1314 | 231_na 76_aa | hypothetical protein | |
| 2127 | CGVP01000061.1 | GCA_001336595.1_02127 | CDS | open | 1317-1487 | 171_na 56_aa | hypothetical protein | |
| 2128 | CGVP01000061.1 | GCA_001336595.1_02128 | CDS | open | 1484-1735 | 252_na 83_aa | hypothetical protein | |
| 2129 | CGVP01000061.1 | misc_RNA | open | 1720-1785 | Intron_gpII | |||
| 2130 | CGVP01000062.1 | GCA_001336595.1_02130 | CDS | open | 700-1635 | 936_na 311_aa | birA | Bifunctional ligaserepressor BirA |
| 2131 | CGVP01000063.1 | GCA_001336595.1_02131 | CDS | open | 557-1459 | 903_na 300_aa | hypothetical protein | |
| 2132 | CGVP01000064.1 | GCA_001336595.1_02132 | CDS | open | 455-1024 | 570_na 189_aa | hypothetical protein | |
| 2133 | CGVP01000065.1 | GCA_001336595.1_02133 | CDS | open | 394-1356 | 963_na 320_aa | hypothetical protein | |
| 2134 | CGVP01000066.1 | GCA_001336595.1_02134 | CDS | open | 497-1324 | 828_na 275_aa | ybiV | Sugar phosphatase YbiV |
| 2135 | CGVP01000067.1 | GCA_001336595.1_02135 | CDS | open | 22-480 | 459_na 152_aa | hypothetical protein | |
| 2136 | CGVP01000067.1 | GCA_001336595.1_02136 | CDS | open | 869-1024 | 156_na 51_aa | hypothetical protein | |
| 2137 | CGVP01000067.1 | GCA_001336595.1_02137 | CDS | open | 1054-1302 | 249_na 82_aa | hypothetical protein | |
| 2138 | CGVP01000071.1 | rRNA | open | 8-96 | 5S ribosomal RNA (partial) | |||
| 2139 | CGVP01000071.1 | tRNA | open | 107-180 | tRNA-Asn(gtt) | |||
| 2140 | CGVP01000074.1 | GCA_001336595.1_02140 | CDS | open | 129-275 | 147_na 48_aa | hypothetical protein |
