HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Treponema pallidum (GCA_005885795.1)

Select a Genome:
PROKKA Annotations for GCA_005885795.1
Genome Selected: Treponema pallidum
ContigsBases CDSrRNA tmRNAtRNA
1 1,139,838 978 6 1 45
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 1032 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:3]    |    Number of Records Found: 1032 [3 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1001 CP040555.1 GCA_005885795.1_01001 CDS open 1103648-1104097 450_na     149_aa ndk Nucleoside diphosphate kinase
1002 CP040555.1 GCA_005885795.1_01002 CDS open 1104223-1104831 609_na     202_aa pth Peptidyl-tRNA hydrolase
1003 CP040555.1 GCA_005885795.1_01003 CDS open 1104866-1105756 891_na     296_aa sigA RNA polymerase sigma factor SigA
1004 CP040555.1 GCA_005885795.1_01004 CDS open 1106006-1106272 267_na     88_aa groS 10 kDa chaperonin
1005 CP040555.1 GCA_005885795.1_01005 CDS open 1106283-1108145 1863_na     620_aa hypothetical protein
1006 CP040555.1 GCA_005885795.1_01006 CDS open 1108183-1108608 426_na     141_aa nusB Transcription antitermination protein NusB
1007 CP040555.1 GCA_005885795.1_01007 CDS open 1108605-1109690 1086_na     361_aa surA Chaperone SurA
1008 CP040555.1 GCA_005885795.1_01008 CDS open 1109763-1111694 1932_na     643_aa hypothetical protein
1009 CP040555.1 GCA_005885795.1_01009 CDS open 1111752-1113266 1515_na     504_aa rny Ribonuclease Y
1010 CP040555.1 GCA_005885795.1_01010 CDS open 1113288-1113731 444_na     147_aa hypothetical protein
1011 CP040555.1 GCA_005885795.1_01011 CDS open 1113732-1115252 1521_na     506_aa gatA Glutamyl-tRNA(Gln) amidotransferase subunit A
1012 CP040555.1 GCA_005885795.1_01012 CDS open 1115245-1116774 1530_na     509_aa gatB Aspartylglutamyl-tRNA(AsnGln) amidotransferase subunit B
1013 CP040555.1 GCA_005885795.1_01013 CDS open 1116870-1118237 1368_na     455_aa radA DNA repair protein RadA
1014 CP040555.1 GCA_005885795.1_01014 CDS open 1118284-1118952 669_na     222_aa recX Regulatory protein RecX
1015 CP040555.1 GCA_005885795.1_01015 CDS open 1118906-1119295 390_na     129_aa rpsI 30S ribosomal protein S9
1016 CP040555.1 GCA_005885795.1_01016 CDS open 1119311-1119739 429_na     142_aa rplM 50S ribosomal protein L13
1017 CP040555.1 GCA_005885795.1_01017 CDS open 1119736-1119978 243_na     80_aa hypothetical protein
1018 CP040555.1 GCA_005885795.1_01018 CDS open 1120172-1121941 1770_na     589_aa hypothetical protein
1019 CP040555.1 GCA_005885795.1_01019 CDS open 1121964-1122839 876_na     291_aa udp Uridine phosphorylase
1020 CP040555.1 GCA_005885795.1_01020 CDS open 1122855-1124912 2058_na     685_aa pcrA_2 ATP-dependent DNA helicase PcrA
1021 CP040555.1 GCA_005885795.1_01021 CDS open 1124950-1125636 687_na     228_aa deaD_2 ATP-dependent RNA helicase DeaD
1022 CP040555.1 GCA_005885795.1_01022 CDS open 1125897-1127726 1830_na     609_aa hypothetical protein
1023 CP040555.1 GCA_005885795.1_01023 CDS open 1127794-1128228 435_na     144_aa hypothetical protein
1024 CP040555.1 GCA_005885795.1_01024 CDS open 1128240-1129175 936_na     311_aa hypothetical protein
1025 CP040555.1 GCA_005885795.1_01025 CDS open 1129249-1130274 1026_na     341_aa yrbG Inner membrane protein YrbG
1026 CP040555.1 GCA_005885795.1_01026 CDS open 1130271-1133225 2955_na     984_aa valS Valine--tRNA ligase
1027 CP040555.1 GCA_005885795.1_01027 CDS open 1133294-1135672 2379_na     792_aa actP Copper-transporting P-type ATPase
1028 CP040555.1 GCA_005885795.1_01028 CDS open 1135762-1136478 717_na     238_aa hypothetical protein
1029 CP040555.1 GCA_005885795.1_01029 CDS open 1136637-1137170 534_na     177_aa tpf1 Antigen TpF1
1030 CP040555.1 GCA_005885795.1_01030 CDS open 1137397-1137969 573_na     190_aa apt Adenine phosphoribosyltransferase
1031 CP040555.1 GCA_005885795.1_01031 CDS open 1137992-1139047 1056_na     351_aa epmA Elongation factor P--(R)-beta-lysine ligase
1032 CP040555.1 GCA_005885795.1_01032 CDS open 1139047-1139646 600_na     199_aa clpP_2 ATP-dependent Clp protease proteolytic subunit