HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus lugdunensis (GCA_008728715.1)

Select a Genome:
PROKKA Annotations for GCA_008728715.1
Genome Selected: Staphylococcus lugdunensis
ContigsBases CDSrRNA tmRNAtRNA
1 2660394 2480 19 1 61
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2648 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2648 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 CP041723.1 GCA_008728715.1_02501 CDS open 2547625-2547834 210_na     69_aa rpmC 50S ribosomal protein L29
2502 CP041723.1 GCA_008728715.1_02502 CDS open 2547852-2548115 264_na     87_aa rpsQ 30S ribosomal protein S17
2503 CP041723.1 GCA_008728715.1_02503 CDS open 2548147-2548515 369_na     122_aa rplN 50S ribosomal protein L14
2504 CP041723.1 GCA_008728715.1_02504 CDS open 2548552-2548869 318_na     105_aa rplX 50S ribosomal protein L24
2505 CP041723.1 GCA_008728715.1_02505 CDS open 2548895-2549434 540_na     179_aa rplE 50S ribosomal protein L5
2506 CP041723.1 GCA_008728715.1_02506 CDS open 2549459-2549644 186_na     61_aa rpsZ 30S ribosomal protein S14 type Z
2507 CP041723.1 GCA_008728715.1_02507 CDS open 2549676-2550074 399_na     132_aa rpsH 30S ribosomal protein S8
2508 CP041723.1 GCA_008728715.1_02508 CDS open 2550099-2550635 537_na     178_aa rplF 50S ribosomal protein L6
2509 CP041723.1 GCA_008728715.1_02509 CDS open 2550667-2551029 363_na     120_aa rplR 50S ribosomal protein L18
2510 CP041723.1 GCA_008728715.1_02510 CDS open 2551050-2551550 501_na     166_aa rpsE 30S ribosomal protein S5
2511 CP041723.1 GCA_008728715.1_02511 CDS open 2551567-2551746 180_na     59_aa rpmD 50S ribosomal protein L30
2512 CP041723.1 GCA_008728715.1_02512 CDS open 2551766-2552206 441_na     146_aa rplO 50S ribosomal protein L15
2513 CP041723.1 GCA_008728715.1_02513 CDS open 2552206-2553498 1293_na     430_aa secY Protein translocase subunit SecY
2514 CP041723.1 GCA_008728715.1_02514 CDS open 2553516-2554166 651_na     216_aa adk Adenylate kinase
2515 CP041723.1 GCA_008728715.1_02515 CDS open 2554360-2554578 219_na     72_aa infA Translation initiation factor IF-1
2516 CP041723.1 GCA_008728715.1_02516 CDS open 2554610-2554723 114_na     37_aa rpmJ 50S ribosomal protein L36
2517 CP041723.1 GCA_008728715.1_02517 CDS open 2554747-2555112 366_na     121_aa rpsM 30S ribosomal protein S13
2518 CP041723.1 GCA_008728715.1_02518 CDS open 2555135-2555524 390_na     129_aa rpsK 30S ribosomal protein S11
2519 CP041723.1 GCA_008728715.1_02519 CDS open 2555612-2556556 945_na     314_aa rpoA DNA-directed RNA polymerase subunit alpha
2520 CP041723.1 GCA_008728715.1_02520 CDS open 2556573-2556941 369_na     122_aa rplQ 50S ribosomal protein L17
2521 CP041723.1 GCA_008728715.1_02521 CDS open 2557299-2558108 810_na     269_aa ecfA1 Energy-coupling factor transporter ATP-binding protein EcfA1
2522 CP041723.1 GCA_008728715.1_02522 CDS open 2558105-2558962 858_na     285_aa ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2
2523 CP041723.1 GCA_008728715.1_02523 CDS open 2558959-2559765 807_na     268_aa ecfT_3 Energy-coupling factor transporter transmembrane protein EcfT
2524 CP041723.1 GCA_008728715.1_02524 CDS open 2559770-2560573 804_na     267_aa truA tRNA pseudouridine synthase A
2525 CP041723.1 misc_RNA open 2560616-2560685 L13_leader
2526 CP041723.1 GCA_008728715.1_02526 CDS open 2560839-2561276 438_na     145_aa rplM 50S ribosomal protein L13
2527 CP041723.1 GCA_008728715.1_02527 CDS open 2561296-2561688 393_na     130_aa rpsI 30S ribosomal protein S9
2528 CP041723.1 GCA_008728715.1_02528 CDS open 2562069-2562578 510_na     169_aa hypothetical protein
2529 CP041723.1 GCA_008728715.1_02529 CDS open 2562669-2562908 240_na     79_aa hypothetical protein
2530 CP041723.1 GCA_008728715.1_02530 CDS open 2562895-2563785 891_na     296_aa btuD_6 Vitamin B12 import ATP-binding protein BtuD
2531 CP041723.1 GCA_008728715.1_02531 CDS open 2563782-2564546 765_na     254_aa hypothetical protein
2532 CP041723.1 GCA_008728715.1_02532 CDS open 2564559-2565272 714_na     237_aa ecsA_2 ABC-type transporter ATP-binding protein EcsA
2533 CP041723.1 GCA_008728715.1_02533 CDS open 2565265-2566806 1542_na     513_aa hypothetical protein
2534 CP041723.1 GCA_008728715.1_02534 CDS open 2567051-2567623 573_na     190_aa hypothetical protein
2535 CP041723.1 GCA_008728715.1_02535 CDS open 2567649-2574773 7125_na     2374_aa lgrB Linear gramicidin synthase subunit B
2536 CP041723.1 GCA_008728715.1_02536 CDS open 2574763-2578983 4221_na     1406_aa tycB Tyrocidine synthase 2
2537 CP041723.1 GCA_008728715.1_02537 CDS open 2579001-2587814 8814_na     2937_aa dltA_3 D-alanine--D-alanyl carrier protein ligase
2538 CP041723.1 GCA_008728715.1_02538 CDS open 2587811-2588497 687_na     228_aa lgrE_2 Linear gramicidin dehydrogenase LgrE
2539 CP041723.1 GCA_008728715.1_02539 CDS open 2588535-2590274 1740_na     579_aa angR Anguibactin system regulator
2540 CP041723.1 GCA_008728715.1_02540 CDS open 2590282-2590935 654_na     217_aa hypothetical protein
2541 CP041723.1 GCA_008728715.1_02541 CDS open 2592188-2592847 660_na     219_aa lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase
2542 CP041723.1 GCA_008728715.1_02542 CDS open 2593145-2593879 735_na     244_aa cobB NAD-dependent protein deacetylase
2543 CP041723.1 GCA_008728715.1_02543 CDS open 2594080-2594835 756_na     251_aa lacR Lactose phosphotransferase system repressor
2544 CP041723.1 GCA_008728715.1_02544 CDS open 2595066-2595494 429_na     142_aa lacA Galactose-6-phosphate isomerase subunit LacA
2545 CP041723.1 GCA_008728715.1_02545 CDS open 2595510-2596025 516_na     171_aa lacB Galactose-6-phosphate isomerase subunit LacB
2546 CP041723.1 GCA_008728715.1_02546 CDS open 2596038-2596973 936_na     311_aa lacC_2 Tagatose-6-phosphate kinase
2547 CP041723.1 GCA_008728715.1_02547 CDS open 2596977-2597951 975_na     324_aa lacD Tagatose 1%2C6-diphosphate aldolase
2548 CP041723.1 GCA_008728715.1_02548 CDS open 2597971-2598282 312_na     103_aa lacF PTS system lactose-specific EIIA component
2549 CP041723.1 GCA_008728715.1_02549 CDS open 2598291-2599172 882_na     293_aa lacE_2 PTS system lactose-specific EIICB component
2550 CP041723.1 GCA_008728715.1_02550 CDS open 2599191-2600573 1383_na     460_aa hypothetical protein
2551 CP041723.1 GCA_008728715.1_02551 CDS open 2600630-2601553 924_na     307_aa hypothetical protein
2552 CP041723.1 GCA_008728715.1_02552 CDS open 2601609-2602220 612_na     203_aa lexA_2 LexA repressor
2553 CP041723.1 GCA_008728715.1_02553 CDS open 2602392-2602619 228_na     75_aa hypothetical protein
2554 CP041723.1 GCA_008728715.1_02554 CDS open 2602647-2603600 954_na     317_aa hypothetical protein
2555 CP041723.1 GCA_008728715.1_02555 CDS open 2603597-2604364 768_na     255_aa hypothetical protein
2556 CP041723.1 GCA_008728715.1_02556 CDS open 2604433-2604744 312_na     103_aa hypothetical protein
2557 CP041723.1 GCA_008728715.1_02557 CDS open 2604692-2605075 384_na     127_aa hypothetical protein
2558 CP041723.1 GCA_008728715.1_02558 CDS open 2605133-2605885 753_na     250_aa hypothetical protein
2559 CP041723.1 GCA_008728715.1_02559 CDS open 2605901-2606044 144_na     47_aa hypothetical protein
2560 CP041723.1 GCA_008728715.1_02560 CDS open 2606054-2606656 603_na     200_aa hypothetical protein
2561 CP041723.1 GCA_008728715.1_02561 CDS open 2606716-2606820 105_na     34_aa hypothetical protein
2562 CP041723.1 GCA_008728715.1_02562 CDS open 2606884-2607063 180_na     59_aa hypothetical protein
2563 CP041723.1 GCA_008728715.1_02563 CDS open 2607132-2607617 486_na     161_aa hypothetical protein
2564 CP041723.1 GCA_008728715.1_02564 CDS open 2607618-2608292 675_na     224_aa hypothetical protein
2565 CP041723.1 GCA_008728715.1_02565 CDS open 2608289-2608726 438_na     145_aa ssbA_2 Single-stranded DNA-binding protein A
2566 CP041723.1 GCA_008728715.1_02566 CDS open 2608804-2609610 807_na     268_aa hypothetical protein
2567 CP041723.1 GCA_008728715.1_02567 CDS open 2609610-2609969 360_na     119_aa hypothetical protein
2568 CP041723.1 GCA_008728715.1_02568 CDS open 2609962-2611197 1236_na     411_aa hypothetical protein
2569 CP041723.1 GCA_008728715.1_02569 CDS open 2611194-2611421 228_na     75_aa hypothetical protein
2570 CP041723.1 GCA_008728715.1_02570 CDS open 2611411-2611650 240_na     79_aa hypothetical protein
2571 CP041723.1 GCA_008728715.1_02571 CDS open 2611660-2612067 408_na     135_aa hypothetical protein
2572 CP041723.1 GCA_008728715.1_02572 CDS open 2612064-2612378 315_na     104_aa hypothetical protein
2573 CP041723.1 GCA_008728715.1_02573 CDS open 2612381-2612632 252_na     83_aa hypothetical protein
2574 CP041723.1 GCA_008728715.1_02574 CDS open 2612639-2613061 423_na     140_aa hypothetical protein
2575 CP041723.1 GCA_008728715.1_02575 CDS open 2613065-2613217 153_na     50_aa hypothetical protein
2576 CP041723.1 GCA_008728715.1_02576 CDS open 2613217-2613333 117_na     38_aa hypothetical protein
2577 CP041723.1 GCA_008728715.1_02577 CDS open 2613430-2613744 315_na     104_aa hypothetical protein
2578 CP041723.1 GCA_008728715.1_02578 CDS open 2613784-2613936 153_na     50_aa hypothetical protein
2579 CP041723.1 GCA_008728715.1_02579 CDS open 2613926-2614093 168_na     55_aa hypothetical protein
2580 CP041723.1 GCA_008728715.1_02580 CDS open 2614090-2614239 150_na     49_aa hypothetical protein
2581 CP041723.1 GCA_008728715.1_02581 CDS open 2614236-2614652 417_na     138_aa hypothetical protein
2582 CP041723.1 GCA_008728715.1_02582 CDS open 2614954-2615382 429_na     142_aa hypothetical protein
2583 CP041723.1 GCA_008728715.1_02583 CDS open 2615369-2616649 1281_na     426_aa hypothetical protein
2584 CP041723.1 GCA_008728715.1_02584 CDS open 2616661-2617821 1161_na     386_aa hypothetical protein
2585 CP041723.1 GCA_008728715.1_02585 CDS open 2617913-2618542 630_na     209_aa hypothetical protein
2586 CP041723.1 GCA_008728715.1_02586 CDS open 2618778-2619173 396_na     131_aa hypothetical protein
2587 CP041723.1 GCA_008728715.1_02587 CDS open 2619180-2620130 951_na     316_aa hypothetical protein
2588 CP041723.1 GCA_008728715.1_02588 CDS open 2620127-2620279 153_na     50_aa hypothetical protein
2589 CP041723.1 GCA_008728715.1_02589 CDS open 2620662-2621267 606_na     201_aa hypothetical protein
2590 CP041723.1 GCA_008728715.1_02590 CDS open 2621285-2622205 921_na     306_aa hypothetical protein
2591 CP041723.1 GCA_008728715.1_02591 CDS open 2622227-2622496 270_na     89_aa hypothetical protein
2592 CP041723.1 GCA_008728715.1_02592 CDS open 2622498-2622827 330_na     109_aa hypothetical protein
2593 CP041723.1 GCA_008728715.1_02593 CDS open 2622824-2623126 303_na     100_aa hypothetical protein
2594 CP041723.1 GCA_008728715.1_02594 CDS open 2623128-2623487 360_na     119_aa hypothetical protein
2595 CP041723.1 GCA_008728715.1_02595 CDS open 2623487-2623876 390_na     129_aa hypothetical protein
2596 CP041723.1 GCA_008728715.1_02596 CDS open 2623924-2624478 555_na     184_aa hypothetical protein
2597 CP041723.1 GCA_008728715.1_02597 CDS open 2624539-2624898 360_na     119_aa hypothetical protein
2598 CP041723.1 GCA_008728715.1_02598 CDS open 2624943-2625287 345_na     114_aa hypothetical protein
2599 CP041723.1 GCA_008728715.1_02599 CDS open 2625302-2628835 3534_na     1177_aa hypothetical protein
2600 CP041723.1 GCA_008728715.1_02600 CDS open 2628847-2629806 960_na     319_aa hypothetical protein
2601 CP041723.1 GCA_008728715.1_02601 CDS open 2629817-2631052 1236_na     411_aa hypothetical protein
2602 CP041723.1 GCA_008728715.1_02602 CDS open 2631053-2632927 1875_na     624_aa hypothetical protein
2603 CP041723.1 GCA_008728715.1_02603 CDS open 2632941-2634098 1158_na     385_aa hypothetical protein
2604 CP041723.1 GCA_008728715.1_02604 CDS open 2634114-2634536 423_na     140_aa hypothetical protein
2605 CP041723.1 GCA_008728715.1_02605 CDS open 2634517-2634915 399_na     132_aa hypothetical protein
2606 CP041723.1 GCA_008728715.1_02606 CDS open 2634967-2635083 117_na     38_aa hypothetical protein
2607 CP041723.1 misc_RNA open 2635071-2635287 Intron_gpI
2608 CP041723.1 GCA_008728715.1_02608 CDS open 2635391-2637100 1710_na     569_aa hypothetical protein
2609 CP041723.1 GCA_008728715.1_02609 CDS open 2637154-2639925 2772_na     923_aa hypothetical protein
2610 CP041723.1 GCA_008728715.1_02610 CDS open 2639982-2640254 273_na     90_aa hypothetical protein
2611 CP041723.1 GCA_008728715.1_02611 CDS open 2640254-2641663 1410_na     469_aa hypothetical protein
2612 CP041723.1 GCA_008728715.1_02612 CDS open 2642143-2642703 561_na     186_aa hypothetical protein
2613 CP041723.1 GCA_008728715.1_02613 CDS open 2642845-2644227 1383_na     460_aa hypothetical protein
2614 CP041723.1 GCA_008728715.1_02614 CDS open 2644284-2645207 924_na     307_aa hypothetical protein
2615 CP041723.1 GCA_008728715.1_02615 CDS open 2645263-2645874 612_na     203_aa lexA_3 LexA repressor
2616 CP041723.1 GCA_008728715.1_02616 CDS open 2646046-2646264 219_na     72_aa hypothetical protein
2617 CP041723.1 GCA_008728715.1_02617 CDS open 2646300-2646914 615_na     204_aa hypothetical protein
2618 CP041723.1 GCA_008728715.1_02618 CDS open 2646925-2647251 327_na     108_aa hypothetical protein
2619 CP041723.1 GCA_008728715.1_02619 CDS open 2647248-2647478 231_na     76_aa hypothetical protein
2620 CP041723.1 GCA_008728715.1_02620 CDS open 2647592-2648014 423_na     140_aa hypothetical protein
2621 CP041723.1 GCA_008728715.1_02621 CDS open 2648083-2648394 312_na     103_aa hypothetical protein
2622 CP041723.1 GCA_008728715.1_02622 CDS open 2648386-2648724 339_na     112_aa hypothetical protein
2623 CP041723.1 GCA_008728715.1_02623 CDS open 2648782-2648952 171_na     56_aa hypothetical protein
2624 CP041723.1 GCA_008728715.1_02624 CDS open 2648997-2649254 258_na     85_aa hypothetical protein
2625 CP041723.1 GCA_008728715.1_02625 CDS open 2649371-2649589 219_na     72_aa hypothetical protein
2626 CP041723.1 GCA_008728715.1_02626 CDS open 2649547-2649690 144_na     47_aa hypothetical protein
2627 CP041723.1 GCA_008728715.1_02627 CDS open 2650360-2650464 105_na     34_aa hypothetical protein
2628 CP041723.1 GCA_008728715.1_02628 CDS open 2650528-2650707 180_na     59_aa hypothetical protein
2629 CP041723.1 GCA_008728715.1_02629 CDS open 2650775-2651173 399_na     132_aa hypothetical protein
2630 CP041723.1 GCA_008728715.1_02630 CDS open 2651393-2651743 351_na     116_aa hypothetical protein
2631 CP041723.1 GCA_008728715.1_02631 CDS open 2651928-2652140 213_na     70_aa hypothetical protein
2632 CP041723.1 GCA_008728715.1_02632 CDS open 2652442-2652954 513_na     170_aa hypothetical protein
2633 CP041723.1 GCA_008728715.1_02633 CDS open 2653593-2653715 123_na     40_aa hypothetical protein
2634 CP041723.1 GCA_008728715.1_02634 CDS open 2654081-2654221 141_na     46_aa hypothetical protein
2635 CP041723.1 GCA_008728715.1_02635 CDS open 2654251-2654823 573_na     190_aa dnaC_2 Replicative DNA helicase
2636 CP041723.1 GCA_008728715.1_02636 CDS open 2654820-2655047 228_na     75_aa hypothetical protein
2637 CP041723.1 GCA_008728715.1_02637 CDS open 2655037-2655276 240_na     79_aa hypothetical protein
2638 CP041723.1 GCA_008728715.1_02638 CDS open 2655286-2655693 408_na     135_aa hypothetical protein
2639 CP041723.1 GCA_008728715.1_02639 CDS open 2655690-2655860 171_na     56_aa hypothetical protein
2640 CP041723.1 GCA_008728715.1_02640 CDS open 2656262-2656669 408_na     135_aa hypothetical protein
2641 CP041723.1 GCA_008728715.1_02641 CDS open 2656840-2656956 117_na     38_aa hypothetical protein
2642 CP041723.1 GCA_008728715.1_02642 CDS open 2657053-2657367 315_na     104_aa hypothetical protein
2643 CP041723.1 GCA_008728715.1_02643 CDS open 2657407-2657559 153_na     50_aa hypothetical protein
2644 CP041723.1 GCA_008728715.1_02644 CDS open 2657549-2657716 168_na     55_aa hypothetical protein
2645 CP041723.1 GCA_008728715.1_02645 CDS open 2657713-2657862 150_na     49_aa hypothetical protein
2646 CP041723.1 GCA_008728715.1_02646 CDS open 2657939-2658274 336_na     111_aa hypothetical protein
2647 CP041723.1 GCA_008728715.1_02647 CDS open 2658577-2659005 429_na     142_aa hypothetical protein
2648 CP041723.1 GCA_008728715.1_02648 CDS open 2658992-2660272 1281_na     426_aa hypothetical protein