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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Agrobacterium tumefaciens (GCA_025560305.1)

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PROKKA Annotations for GCA_025560305.1
Genome Selected: Agrobacterium tumefaciens
ContigsBases CDSrRNA tmRNAtRNA
4 5,831,233 5472 12 1 60
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:12]    |    Number of Records Found: 5605 [12 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  12  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
5501 CP048535.1 GCA_025560305.1_05501 CDS open 131663-132838 1176_na     391_aa Cytochrome P450-pinF2%2C plant-inducible
5502 CP048535.1 GCA_025560305.1_05502 CDS open 133114-134037 924_na     307_aa IS110 family transposase ISSfr2
5503 CP048535.1 GCA_025560305.1_05503 CDS open 134933-135871 939_na     312_aa hypothetical protein
5504 CP048535.1 misc_RNA open 136114-136222 Atu_At1
5505 CP048535.1 GCA_025560305.1_05505 CDS open 136772-137206 435_na     144_aa hypothetical protein
5506 CP048535.1 GCA_025560305.1_05506 CDS open 137303-137407 105_na     34_aa hypothetical protein
5507 CP048535.1 GCA_025560305.1_05507 CDS open 137605-137772 168_na     55_aa hypothetical protein
5508 CP048535.1 GCA_025560305.1_05508 CDS open 139850-140560 711_na     236_aa hypothetical protein
5509 CP048535.1 GCA_025560305.1_05509 CDS open 141023-141265 243_na     80_aa hypothetical protein
5510 CP048535.1 GCA_025560305.1_05510 CDS open 141705-142436 732_na     243_aa tzs Adenylate dimethylallyltransferase
5511 CP048535.1 GCA_025560305.1_05511 CDS open 143357-145774 2418_na     805_aa virA Wide host range VirA protein
5512 CP048535.1 GCA_025560305.1_05512 CDS open 146319-147056 738_na     245_aa hypothetical protein
5513 CP048535.1 GCA_025560305.1_05513 CDS open 147056-147421 366_na     121_aa virB2 Protein virB2
5514 CP048535.1 GCA_025560305.1_05514 CDS open 147421-147747 327_na     108_aa hypothetical protein
5515 CP048535.1 GCA_025560305.1_05515 CDS open 147747-150116 2370_na     789_aa virB4_3 Protein virB4
5516 CP048535.1 GCA_025560305.1_05516 CDS open 150133-150795 663_na     220_aa virB5_2 Protein virB5
5517 CP048535.1 GCA_025560305.1_05517 CDS open 150896-151783 888_na     295_aa hypothetical protein
5518 CP048535.1 GCA_025560305.1_05518 CDS open 151973-152686 714_na     237_aa virB8_2 Protein virB8
5519 CP048535.1 GCA_025560305.1_05519 CDS open 152683-153564 882_na     293_aa virB9_2 Protein virB9
5520 CP048535.1 misc_RNA open 153056-153144 Atu_Ti3
5521 CP048535.1 GCA_025560305.1_05521 CDS open 153561-154694 1134_na     377_aa Protein virB10
5522 CP048535.1 GCA_025560305.1_05522 CDS open 154735-155769 1035_na     344_aa Type IV secretion system protein VirB11
5523 CP048535.1 GCA_025560305.1_05523 CDS open 155988-156749 762_na     253_aa ompR_5 Transcriptional regulatory protein OmpR
5524 CP048535.1 misc_RNA open 156841-156947 Atu_Ti4
5525 CP048535.1 GCA_025560305.1_05525 CDS open 156891-157499 609_na     202_aa virC2 Protein virC2
5526 CP048535.1 GCA_025560305.1_05526 CDS open 157502-158197 696_na     231_aa virC1 Protein virC1
5527 CP048535.1 GCA_025560305.1_05527 CDS open 158468-158911 444_na     147_aa virD1 T-DNA border endonuclease VirD1
5528 CP048535.1 GCA_025560305.1_05528 CDS open 158945-160288 1344_na     447_aa virD2 T-DNA border endonuclease VirD2
5529 CP048535.1 GCA_025560305.1_05529 CDS open 160303-162324 2022_na     673_aa hypothetical protein
5530 CP048535.1 GCA_025560305.1_05530 CDS open 162398-164404 2007_na     668_aa virD4 Protein VirD4
5531 CP048535.1 GCA_025560305.1_05531 CDS open 164516-167041 2526_na     841_aa hypothetical protein
5532 CP048535.1 GCA_025560305.1_05532 CDS open 168497-168688 192_na     63_aa virE1 Protein virE1
5533 CP048535.1 GCA_025560305.1_05533 CDS open 168702-170372 1671_na     556_aa virE2 Single-strand DNA-binding protein
5534 CP048535.1 GCA_025560305.1_05534 CDS open 170439-172493 2055_na     684_aa hypothetical protein
5535 CP048535.1 GCA_025560305.1_05535 CDS open 172981-173253 273_na     90_aa hypothetical protein
5536 CP048535.1 GCA_025560305.1_05536 CDS open 173315-173686 372_na     123_aa hypothetical protein
5537 CP048535.1 GCA_025560305.1_05537 CDS open 173662-174393 732_na     243_aa hypothetical protein
5538 CP048535.1 GCA_025560305.1_05538 CDS open 174417-174749 333_na     110_aa hypothetical protein
5539 CP048535.1 GCA_025560305.1_05539 CDS open 175147-175923 777_na     258_aa cysQ_6 3(2)%2C5-bisphosphate nucleotidase CysQ
5540 CP048535.1 GCA_025560305.1_05540 CDS open 175916-176200 285_na     94_aa hypothetical protein
5541 CP048535.1 GCA_025560305.1_05541 CDS open 177091-178707 1617_na     538_aa hypothetical protein
5542 CP048535.1 GCA_025560305.1_05542 CDS open 180198-180440 243_na     80_aa hypothetical protein
5543 CP048535.1 GCA_025560305.1_05543 CDS open 181146-181841 696_na     231_aa hypothetical protein
5544 CP048535.1 GCA_025560305.1_05544 CDS open 182386-183264 879_na     292_aa hypothetical protein
5545 CP048535.1 GCA_025560305.1_05545 CDS open 183726-184832 1107_na     368_aa hypothetical protein
5546 CP048535.1 GCA_025560305.1_05546 CDS open 185596-186261 666_na     221_aa hypothetical protein
5547 CP048535.1 GCA_025560305.1_05547 CDS open 186768-188171 1404_na     467_aa mdlY Mandelamide hydrolase
5548 CP048535.1 GCA_025560305.1_05548 CDS open 188577-190778 2202_na     733_aa hypothetical protein
5549 CP048535.1 GCA_025560305.1_05549 CDS open 192112-192234 123_na     40_aa hypothetical protein
5550 CP048535.1 GCA_025560305.1_05550 CDS open 192712-193272 561_na     186_aa hypothetical protein
5551 CP048535.1 GCA_025560305.1_05551 CDS open 194418-194909 492_na     163_aa hypothetical protein
5552 CP048535.1 GCA_025560305.1_05552 CDS open 195980-197272 1293_na     430_aa hypothetical protein
5553 CP048535.1 GCA_025560305.1_05553 CDS open 197558-198745 1188_na     395_aa putative peptidase
5554 CP048535.1 GCA_025560305.1_05554 CDS open 199460-199726 267_na     88_aa IS3 family transposase ISSusp2
5555 CP048535.1 GCA_025560305.1_05555 CDS open 199753-200547 795_na     264_aa IS3 family transposase ISPbe1
5556 CP048535.1 GCA_025560305.1_05556 CDS open 200587-200907 321_na     106_aa hypothetical protein
5557 CP048535.1 GCA_025560305.1_05557 CDS open 201022-201354 333_na     110_aa traR_3 Transcriptional activator protein TraR
5558 CP048535.1 GCA_025560305.1_05558 CDS open 201556-201726 171_na     56_aa traR_4 Transcriptional activator protein TraR
5559 CP048535.1 GCA_025560305.1_05559 CDS open 201824-202645 822_na     273_aa ydcV_7 Inner membrane ABC transporter permease protein YdcV
5560 CP048535.1 GCA_025560305.1_05560 CDS open 202642-203547 906_na     301_aa potB_6 Spermidineputrescine transport system permease protein PotB
5561 CP048535.1 GCA_025560305.1_05561 CDS open 203552-204661 1110_na     369_aa potA_8 Spermidineputrescine import ATP-binding protein PotA
5562 CP048535.1 GCA_025560305.1_05562 CDS open 204785-205840 1056_na     351_aa hypothetical protein
5563 CP048535.1 GCA_025560305.1_05563 CDS open 205942-206841 900_na     299_aa trg Methyl-accepting chemotaxis protein III
5564 CP048535.1 GCA_025560305.1_05564 CDS open 206941-207099 159_na     52_aa hypothetical protein
5565 CP048535.1 GCA_025560305.1_05565 CDS open 207386-209167 1782_na     593_aa hypothetical protein
5566 CP048535.1 GCA_025560305.1_05566 CDS open 209192-210220 1029_na     342_aa potD_2 Spermidineputrescine-binding periplasmic protein
5567 CP048535.1 GCA_025560305.1_05567 CDS open 210276-211358 1083_na     360_aa potA_9 Spermidineputrescine import ATP-binding protein PotA
5568 CP048535.1 GCA_025560305.1_05568 CDS open 211358-212566 1209_na     402_aa putative peptidase
5569 CP048535.1 GCA_025560305.1_05569 CDS open 212620-213438 819_na     272_aa frlD Fructosamine kinase FrlD
5570 CP048535.1 GCA_025560305.1_05570 CDS open 213448-214512 1065_na     354_aa frlB Fructosamine deglycase FrlB
5571 CP048535.1 GCA_025560305.1_05571 CDS open 214613-215719 1107_na     368_aa ccpA_4 Catabolite control protein A
5572 CP048535.1 GCA_025560305.1_05572 CDS open 215895-216641 747_na     248_aa fabG_9 3-oxoacyl-[acyl-carrier-protein] reductase
5573 CP048535.1 GCA_025560305.1_05573 CDS open 216668-218488 1821_na     606_aa edd_2 Phosphogluconate dehydratase
5574 CP048535.1 GCA_025560305.1_05574 CDS open 218512-219576 1065_na     354_aa yajO_5 1-deoxyxylulose-5-phosphate synthase YajO
5575 CP048535.1 GCA_025560305.1_05575 CDS open 219696-220823 1128_na     375_aa ccpA_5 Catabolite control protein A
5576 CP048535.1 GCA_025560305.1_05576 CDS open 221113-221889 777_na     258_aa gdh_2 Galactitol 2-dehydrogenase
5577 CP048535.1 GCA_025560305.1_05577 CDS open 221965-223494 1530_na     509_aa gsiB_6 Glutathione-binding protein GsiB
5578 CP048535.1 GCA_025560305.1_05578 CDS open 223521-224348 828_na     275_aa gsiD_10 Glutathione transport system permease protein GsiD
5579 CP048535.1 GCA_025560305.1_05579 CDS open 224345-225316 972_na     323_aa gsiC_19 Glutathione transport system permease protein GsiC
5580 CP048535.1 GCA_025560305.1_05580 CDS open 225313-227022 1710_na     569_aa gsiA_17 Glutathione import ATP-binding protein GsiA
5581 CP048535.1 GCA_025560305.1_05581 CDS open 227296-228006 711_na     236_aa ucpA_3 Oxidoreductase UcpA
5582 CP048535.1 GCA_025560305.1_05582 CDS open 228025-229338 1314_na     437_aa abo_3 4-methylaminobutanoate oxidase (formaldehyde-forming)
5583 CP048535.1 GCA_025560305.1_05583 CDS open 229375-231429 2055_na     684_aa apc3_3 Acetophenone carboxylase gamma subunit
5584 CP048535.1 GCA_025560305.1_05584 CDS open 231426-233078 1653_na     550_aa apc4_3 Acetophenone carboxylase delta subunit
5585 CP048535.1 GCA_025560305.1_05585 CDS open 233212-233394 183_na     60_aa hypothetical protein
5586 CP048535.1 GCA_025560305.1_05586 CDS open 233435-234301 867_na     288_aa srlR_3 Glucitol operon repressor
5587 CP048535.1 GCA_025560305.1_05587 CDS open 234381-234803 423_na     140_aa hypothetical protein
5588 CP048535.1 GCA_025560305.1_05588 CDS open 235189-236130 942_na     313_aa gsiC_20 Glutathione transport system permease protein GsiC
5589 CP048535.1 GCA_025560305.1_05589 CDS open 236127-237008 882_na     293_aa gsiD_11 Glutathione transport system permease protein GsiD
5590 CP048535.1 GCA_025560305.1_05590 CDS open 237008-238774 1767_na     588_aa gsiA_18 Glutathione import ATP-binding protein GsiA
5591 CP048535.1 GCA_025560305.1_05591 CDS open 238889-240457 1569_na     522_aa hbpA Heme-binding protein A
5592 CP048535.1 GCA_025560305.1_05592 CDS open 240812-241027 216_na     71_aa hypothetical protein
5593 CP048535.1 GCA_025560305.1_05593 CDS open 241337-241663 327_na     108_aa hypothetical protein
5594 CP048535.1 GCA_025560305.1_05594 CDS open 241919-243232 1314_na     437_aa hypothetical protein
5595 CP048535.1 GCA_025560305.1_05595 CDS open 243244-243720 477_na     158_aa hypothetical protein
5596 CP048535.1 GCA_025560305.1_05596 CDS open 243720-244574 855_na     284_aa hypothetical protein
5597 CP048535.1 GCA_025560305.1_05597 CDS open 244591-245253 663_na     220_aa hypothetical protein
5598 CP048535.1 GCA_025560305.1_05598 CDS open 245268-246455 1188_na     395_aa hypothetical protein
5599 CP048535.1 GCA_025560305.1_05599 CDS open 246449-246679 231_na     76_aa hypothetical protein
5600 CP048535.1 GCA_025560305.1_05600 CDS open 246673-247482 810_na     269_aa hypothetical protein
5601 CP048535.1 GCA_025560305.1_05601 CDS open 247454-249922 2469_na     822_aa virB4_4 Type IV secretion system protein virB4
5602 CP048535.1 GCA_025560305.1_05602 CDS open 249933-250232 300_na     99_aa hypothetical protein
5603 CP048535.1 GCA_025560305.1_05603 CDS open 250225-250626 402_na     133_aa hypothetical protein
5604 CP048535.1 GCA_025560305.1_05604 CDS open 250616-251587 972_na     323_aa Type IV secretion system protein VirB11
5605 CP048535.1 GCA_025560305.1_05605 CDS open 251584-252219 636_na     211_aa hypothetical protein