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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Variovorax paradoxus (GCA_030812115.1)

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PROKKA Annotations for GCA_030812115.1
Genome Selected: Variovorax paradoxus
ContigsBases CDSrRNA tmRNAtRNA
30 7,076,942 6489 3 1 64
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:14]    |    Number of Records Found: 6588 [14 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  10  11  12  13  14  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
6501 JAUSSC010000022.1 GCA_030812115.1_06501 CDS open 237-2135 1899_na     632_aa uup ABC transporter ATP-binding protein uup
6502 JAUSSC010000022.1 GCA_030812115.1_06502 CDS open 2241-4040 1800_na     599_aa clsC_7 Cardiolipin synthase C
6503 JAUSSC010000022.1 GCA_030812115.1_06503 CDS open 4047-4952 906_na     301_aa hypothetical protein
6504 JAUSSC010000022.1 GCA_030812115.1_06504 CDS open 4990-7278 2289_na     762_aa btuB_2 Vitamin B12 transporter BtuB
6505 JAUSSC010000022.1 GCA_030812115.1_06505 CDS open 7397-7780 384_na     127_aa hypothetical protein
6506 JAUSSC010000022.1 GCA_030812115.1_06506 CDS open 7792-9027 1236_na     411_aa hypothetical protein
6507 JAUSSC010000022.1 GCA_030812115.1_06507 CDS open 9080-9493 414_na     137_aa hypothetical protein
6508 JAUSSC010000022.1 GCA_030812115.1_06508 CDS open 9506-10111 606_na     201_aa hypothetical protein
6509 JAUSSC010000022.1 GCA_030812115.1_06509 CDS open 10120-11325 1206_na     401_aa hypothetical protein
6510 JAUSSC010000022.1 GCA_030812115.1_06510 CDS open 11356-12330 975_na     324_aa hypothetical protein
6511 JAUSSC010000022.1 GCA_030812115.1_06511 CDS open 12334-12567 234_na     77_aa hypothetical protein
6512 JAUSSC010000022.1 GCA_030812115.1_06512 CDS open 12564-14330 1767_na     588_aa mhpA_2 3-(3-hydroxy-phenyl)propionate3-hydroxycinnamic acid hydroxylase
6513 JAUSSC010000022.1 GCA_030812115.1_06513 CDS open 14412-15194 783_na     260_aa hypothetical protein
6514 JAUSSC010000022.1 GCA_030812115.1_06514 CDS open 15217-15987 771_na     256_aa loiP Metalloprotease LoiP
6515 JAUSSC010000022.1 GCA_030812115.1_06515 CDS open 16162-16470 309_na     102_aa hypothetical protein
6516 JAUSSC010000022.1 GCA_030812115.1_06516 CDS open 16550-17605 1056_na     351_aa hypothetical protein
6517 JAUSSC010000022.1 GCA_030812115.1_06517 CDS open 17611-18222 612_na     203_aa hypothetical protein
6518 JAUSSC010000022.1 GCA_030812115.1_06518 CDS open 18273-18467 195_na     64_aa hypothetical protein
6519 JAUSSC010000022.1 GCA_030812115.1_06519 CDS open 18474-19544 1071_na     356_aa hypothetical protein
6520 JAUSSC010000022.1 GCA_030812115.1_06520 CDS open 19676-20878 1203_na     400_aa hypothetical protein
6521 JAUSSC010000022.1 GCA_030812115.1_06521 CDS open 20956-21267 312_na     103_aa hypothetical protein
6522 JAUSSC010000022.1 GCA_030812115.1_06522 CDS open 21317-22390 1074_na     357_aa hypothetical protein
6523 JAUSSC010000022.1 GCA_030812115.1_06523 CDS open 22470-23327 858_na     285_aa hypothetical protein
6524 JAUSSC010000022.1 GCA_030812115.1_06524 CDS open 23383-24717 1335_na     444_aa bauA_2 Beta-alanine--pyruvate aminotransferase
6525 JAUSSC010000022.1 GCA_030812115.1_06525 CDS open 24788-25663 876_na     291_aa purU Formyltetrahydrofolate deformylase
6526 JAUSSC010000022.1 GCA_030812115.1_06526 CDS open 25728-26465 738_na     245_aa hypothetical protein
6527 JAUSSC010000022.1 GCA_030812115.1_06527 CDS open 26462-27250 789_na     262_aa hypothetical protein
6528 JAUSSC010000022.1 GCA_030812115.1_06528 CDS open 27189-27710 522_na     173_aa hypothetical protein
6529 JAUSSC010000022.1 GCA_030812115.1_06529 CDS open 27749-28123 375_na     124_aa hypothetical protein
6530 JAUSSC010000022.1 GCA_030812115.1_06530 CDS open 28244-29563 1320_na     439_aa hypothetical protein
6531 JAUSSC010000022.1 GCA_030812115.1_06531 CDS open 29629-32922 3294_na     1097_aa accA_2 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
6532 JAUSSC010000022.1 GCA_030812115.1_06532 CDS open 32933-34552 1620_na     539_aa lcfB_10 Long-chain-fatty-acid--CoA ligase
6533 JAUSSC010000022.1 GCA_030812115.1_06533 CDS open 34639-35346 708_na     235_aa hypothetical protein
6534 JAUSSC010000022.1 GCA_030812115.1_06534 CDS open 35370-36626 1257_na     418_aa braC_10 Leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein
6535 JAUSSC010000022.1 GCA_030812115.1_06535 CDS open 37047-40265 3219_na     1072_aa Bifunctional cytochrome P450NADPH--P450 reductase
6536 JAUSSC010000023.1 GCA_030812115.1_06536 CDS open 169-576 408_na     135_aa hypothetical protein
6537 JAUSSC010000023.1 GCA_030812115.1_06537 CDS open 573-1274 702_na     233_aa hypothetical protein
6538 JAUSSC010000023.1 GCA_030812115.1_06538 CDS open 1430-1621 192_na     63_aa hypothetical protein
6539 JAUSSC010000023.1 GCA_030812115.1_06539 CDS open 2398-4539 2142_na     713_aa fatA Ferric-anguibactin receptor FatA
6540 JAUSSC010000023.1 GCA_030812115.1_06540 CDS open 4541-7111 2571_na     856_aa hypothetical protein
6541 JAUSSC010000023.1 GCA_030812115.1_06541 CDS open 7248-7469 222_na     73_aa hypothetical protein
6542 JAUSSC010000023.1 GCA_030812115.1_06542 CDS open 7547-8275 729_na     242_aa hypothetical protein
6543 JAUSSC010000023.1 GCA_030812115.1_06543 CDS open 8272-9228 957_na     318_aa rsmI_2 Ribosomal RNA small subunit methyltransferase I
6544 JAUSSC010000023.1 GCA_030812115.1_06544 CDS open 9280-9657 378_na     125_aa hypothetical protein
6545 JAUSSC010000023.1 GCA_030812115.1_06545 CDS open 9744-10388 645_na     214_aa gmhA Phosphoheptose isomerase
6546 JAUSSC010000023.1 GCA_030812115.1_06546 CDS open 10385-11197 813_na     270_aa hypothetical protein
6547 JAUSSC010000023.1 GCA_030812115.1_06547 CDS open 11228-12136 909_na     302_aa glxR_5 2-hydroxy-3-oxopropionate reductase
6548 JAUSSC010000023.1 GCA_030812115.1_06548 CDS open 12203-13339 1137_na     378_aa pilT_2 Twitching mobility protein
6549 JAUSSC010000023.1 GCA_030812115.1_06549 CDS open 13370-14413 1044_na     347_aa pilT_3 Twitching mobility protein
6550 JAUSSC010000023.1 GCA_030812115.1_06550 CDS open 14465-15166 702_na     233_aa yggS Pyridoxal phosphate homeostasis protein
6551 JAUSSC010000023.1 GCA_030812115.1_06551 CDS open 15177-15644 468_na     155_aa lrp_11 Leucine-responsive regulatory protein
6552 JAUSSC010000023.1 GCA_030812115.1_06552 CDS open 15787-16254 468_na     155_aa hypothetical protein
6553 JAUSSC010000023.1 GCA_030812115.1_06553 CDS open 16492-17763 1272_na     423_aa gdhA Glutamate dehydrogenase
6554 JAUSSC010000023.1 GCA_030812115.1_06554 CDS open 17806-18450 645_na     214_aa coaA Pantothenate kinase
6555 JAUSSC010000023.1 GCA_030812115.1_06555 CDS open 18534-19208 675_na     224_aa hypothetical protein
6556 JAUSSC010000023.1 GCA_030812115.1_06556 CDS open 19227-20138 912_na     303_aa rocF Arginase
6557 JAUSSC010000023.1 GCA_030812115.1_06557 CDS open 20186-22240 2055_na     684_aa hypothetical protein
6558 JAUSSC010000023.1 GCA_030812115.1_06558 CDS open 22419-24137 1719_na     572_aa Putative diacyglycerol O-acyltransferase
6559 JAUSSC010000023.1 GCA_030812115.1_06559 CDS open 24284-24844 561_na     186_aa hypothetical protein
6560 JAUSSC010000023.1 GCA_030812115.1_06560 CDS open 24899-25411 513_na     170_aa hypothetical protein
6561 JAUSSC010000023.1 GCA_030812115.1_06561 CDS open 25434-26069 636_na     211_aa hypothetical protein
6562 JAUSSC010000023.1 GCA_030812115.1_06562 CDS open 26164-26937 774_na     257_aa hypothetical protein
6563 JAUSSC010000024.1 GCA_030812115.1_06563 CDS open 17-253 237_na     78_aa hypothetical protein
6564 JAUSSC010000024.1 GCA_030812115.1_06564 CDS open 284-739 456_na     151_aa aroQ_2 3-dehydroquinate dehydratase
6565 JAUSSC010000024.1 GCA_030812115.1_06565 CDS open 736-1299 564_na     187_aa hypothetical protein
6566 JAUSSC010000024.1 GCA_030812115.1_06566 CDS open 1296-2576 1281_na     426_aa siaM_2 Sialic acid TRAP transporter large permease protein SiaM
6567 JAUSSC010000024.1 GCA_030812115.1_06567 CDS open 2602-4005 1404_na     467_aa hypothetical protein
6568 JAUSSC010000024.1 GCA_030812115.1_06568 CDS open 3986-4915 930_na     309_aa pip Proline iminopeptidase
6569 JAUSSC010000024.1 GCA_030812115.1_06569 CDS open 4928-6109 1182_na     393_aa pqqE PqqA peptide cyclase
6570 JAUSSC010000024.1 GCA_030812115.1_06570 CDS open 6087-6359 273_na     90_aa pqqD PqqA binding protein
6571 JAUSSC010000024.1 GCA_030812115.1_06571 CDS open 6356-7096 741_na     246_aa pqqC Pyrroloquinoline-quinone synthase
6572 JAUSSC010000024.1 GCA_030812115.1_06572 CDS open 7101-8021 921_na     306_aa pqqB Coenzyme PQQ synthesis protein B
6573 JAUSSC010000024.1 GCA_030812115.1_06573 CDS open 8188-10413 2226_na     741_aa bamB_3 Outer membrane protein assembly factor BamB
6574 JAUSSC010000024.1 GCA_030812115.1_06574 CDS open 10448-11509 1062_na     353_aa hypothetical protein
6575 JAUSSC010000024.1 GCA_030812115.1_06575 CDS open 11677-11916 240_na     79_aa hypothetical protein
6576 JAUSSC010000025.1 rRNA open 464-1994 16S ribosomal RNA
6577 JAUSSC010000025.1 tRNA open 2074-2150 tRNA-Ile(gat)
6578 JAUSSC010000025.1 tRNA open 2180-2255 tRNA-Ala(tgc)
6579 JAUSSC010000025.1 rRNA open 2582-5452 23S ribosomal RNA
6580 JAUSSC010000025.1 rRNA open 5602-5708 5S ribosomal RNA
6581 JAUSSC010000026.1 GCA_030812115.1_06581 CDS open 316-1188 873_na     290_aa hypothetical protein
6582 JAUSSC010000026.1 GCA_030812115.1_06582 CDS open 1899-2210 312_na     103_aa hypothetical protein
6583 JAUSSC010000026.1 GCA_030812115.1_06583 CDS open 2250-2603 354_na     117_aa hypothetical protein
6584 JAUSSC010000026.1 GCA_030812115.1_06584 CDS open 2633-2809 177_na     58_aa hypothetical protein
6585 JAUSSC010000027.1 GCA_030812115.1_06585 CDS open 144-401 258_na     85_aa hypothetical protein
6586 JAUSSC010000028.1 GCA_030812115.1_06586 CDS open 43-1458 1416_na     471_aa IS1182 family transposase ISCfr1
6587 JAUSSC010000029.1 GCA_030812115.1_06587 CDS open 27-791 765_na     254_aa IS3 family transposase ISBcen7
6588 JAUSSC010000029.1 GCA_030812115.1_06588 CDS open 887-1294 408_na     135_aa IS3 family transposase ISPa57