HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Porphyromonas pasteri (GCA_946222795.1)

Select a Genome:
PROKKA Annotations for GCA_946222795.1
Genome Selected: Porphyromonas pasteri
ContigsBases CDSrRNA tmRNAtRNA
188 2,086,601 1606 1 1 41
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 1656 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:4]    |    Number of Records Found: 1656 [4 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
1501 CAMIKB010000128.1 GCA_946222795.1_01501 CDS open 1725-4565 2841_na     946_aa hypothetical protein
1502 CAMIKB010000128.1 tRNA open 4660-4742 tRNA-Leu(tag)
1503 CAMIKB010000128.1 misc_RNA open 4858-4960 TPP
1504 CAMIKB010000129.1 GCA_946222795.1_01504 CDS open 64-588 525_na     174_aa hypothetical protein
1505 CAMIKB010000129.1 GCA_946222795.1_01505 CDS open 828-2123 1296_na     431_aa tyrS Tyrosine--tRNA ligase
1506 CAMIKB010000129.1 GCA_946222795.1_01506 CDS open 2154-2393 240_na     79_aa hypothetical protein
1507 CAMIKB010000129.1 GCA_946222795.1_01507 CDS open 2667-3122 456_na     151_aa hypothetical protein
1508 CAMIKB010000129.1 GCA_946222795.1_01508 CDS open 3164-4042 879_na     292_aa hypothetical protein
1509 CAMIKB010000129.1 GCA_946222795.1_01509 CDS open 4055-4933 879_na     292_aa hypothetical protein
1510 CAMIKB010000130.1 misc_RNA open 433-708 Cobalamin
1511 CAMIKB010000130.1 tRNA open 1534-1617 tRNA-Leu(taa)
1512 CAMIKB010000130.1 GCA_946222795.1_01512 CDS open 1979-2242 264_na     87_aa hypothetical protein
1513 CAMIKB010000130.1 GCA_946222795.1_01513 CDS open 2296-3876 1581_na     526_aa cydA Cytochrome bd ubiquinol oxidase subunit 1
1514 CAMIKB010000130.1 GCA_946222795.1_01514 CDS open 3919-5103 1185_na     394_aa cydB Cytochrome bd-I ubiquinol oxidase subunit 2
1515 CAMIKB010000131.1 GCA_946222795.1_01515 CDS open 914-1513 600_na     199_aa hypothetical protein
1516 CAMIKB010000131.1 GCA_946222795.1_01516 CDS open 2114-2557 444_na     147_aa hypothetical protein
1517 CAMIKB010000131.1 GCA_946222795.1_01517 CDS open 2561-3244 684_na     227_aa putative protein
1518 CAMIKB010000131.1 GCA_946222795.1_01518 CDS open 3329-4777 1449_na     482_aa hypothetical protein
1519 CAMIKB010000132.1 GCA_946222795.1_01519 CDS open 122-2275 2154_na     717_aa mutB Methylmalonyl-CoA mutase large subunit
1520 CAMIKB010000132.1 GCA_946222795.1_01520 CDS open 2383-3012 630_na     209_aa rclC Inner membrane protein RclC
1521 CAMIKB010000132.1 GCA_946222795.1_01521 CDS open 3334-3423 90_na     29_aa hypothetical protein
1522 CAMIKB010000132.1 GCA_946222795.1_01522 CDS open 3535-4047 513_na     170_aa hypothetical protein
1523 CAMIKB010000132.1 GCA_946222795.1_01523 CDS open 4959-5222 264_na     87_aa hypothetical protein
1524 CAMIKB010000133.1 GCA_946222795.1_01524 CDS open 407-1162 756_na     251_aa frdB Fumarate reductase iron-sulfur subunit
1525 CAMIKB010000133.1 GCA_946222795.1_01525 CDS open 1182-3125 1944_na     647_aa frdA Fumarate reductase flavoprotein subunit
1526 CAMIKB010000133.1 GCA_946222795.1_01526 CDS open 3169-3876 708_na     235_aa hypothetical protein
1527 CAMIKB010000133.1 GCA_946222795.1_01527 CDS open 4197-4934 738_na     245_aa hypothetical protein
1528 CAMIKB010000134.1 GCA_946222795.1_01528 CDS open 166-1419 1254_na     417_aa hypothetical protein
1529 CAMIKB010000134.1 GCA_946222795.1_01529 CDS open 1453-2163 711_na     236_aa hypothetical protein
1530 CAMIKB010000134.1 GCA_946222795.1_01530 CDS open 2181-3527 1347_na     448_aa hypothetical protein
1531 CAMIKB010000134.1 GCA_946222795.1_01531 CDS open 3626-4798 1173_na     390_aa hypothetical protein
1532 CAMIKB010000135.1 GCA_946222795.1_01532 CDS open 369-1331 963_na     320_aa hypothetical protein
1533 CAMIKB010000135.1 tRNA open 1638-1711 tRNA-Gly(ccc)
1534 CAMIKB010000135.1 GCA_946222795.1_01534 CDS open 1798-2481 684_na     227_aa hypothetical protein
1535 CAMIKB010000135.1 GCA_946222795.1_01535 CDS open 2584-4527 1944_na     647_aa nadE Glutamine-dependent NAD(+) synthetase
1536 CAMIKB010000136.1 GCA_946222795.1_01536 CDS open 43-846 804_na     267_aa hypothetical protein
1537 CAMIKB010000136.1 GCA_946222795.1_01537 CDS open 874-1350 477_na     158_aa sulD Bifunctional folate synthesis protein
1538 CAMIKB010000136.1 GCA_946222795.1_01538 CDS open 1368-2429 1062_na     353_aa queA_2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
1539 CAMIKB010000136.1 GCA_946222795.1_01539 CDS open 2447-3178 732_na     243_aa truB tRNA pseudouridine synthase B
1540 CAMIKB010000136.1 GCA_946222795.1_01540 CDS open 3182-4015 834_na     277_aa uppP Undecaprenyl-diphosphatase
1541 CAMIKB010000136.1 GCA_946222795.1_01541 CDS open 4015-4260 246_na     81_aa hypothetical protein
1542 CAMIKB010000136.1 GCA_946222795.1_01542 CDS open 4304-4774 471_na     156_aa hypothetical protein
1543 CAMIKB010000137.1 GCA_946222795.1_01543 CDS open 42-1826 1785_na     594_aa hypothetical protein
1544 CAMIKB010000137.1 GCA_946222795.1_01544 CDS open 1861-3405 1545_na     514_aa hypothetical protein
1545 CAMIKB010000137.1 GCA_946222795.1_01545 CDS open 3432-3764 333_na     110_aa yciH putative protein YciH
1546 CAMIKB010000137.1 GCA_946222795.1_01546 CDS open 3770-4252 483_na     160_aa coaD Phosphopantetheine adenylyltransferase
1547 CAMIKB010000137.1 GCA_946222795.1_01547 CDS open 4262-4723 462_na     153_aa putative peptidase
1548 CAMIKB010000138.1 GCA_946222795.1_01548 CDS open 4-624 621_na     206_aa hypothetical protein
1549 CAMIKB010000138.1 GCA_946222795.1_01549 CDS open 624-1832 1209_na     402_aa undec1A CysteineCysteine sulfinic acid decarboxylase
1550 CAMIKB010000138.1 GCA_946222795.1_01550 CDS open 1868-2764 897_na     298_aa hypothetical protein
1551 CAMIKB010000138.1 GCA_946222795.1_01551 CDS open 2783-4450 1668_na     555_aa recN DNA repair protein RecN
1552 CAMIKB010000139.1 GCA_946222795.1_01552 CDS open 1137-1289 153_na     50_aa hypothetical protein
1553 CAMIKB010000139.1 GCA_946222795.1_01553 CDS open 1321-2469 1149_na     382_aa hypothetical protein
1554 CAMIKB010000139.1 GCA_946222795.1_01554 CDS open 2818-2949 132_na     43_aa hypothetical protein
1555 CAMIKB010000139.1 GCA_946222795.1_01555 CDS open 3036-3815 780_na     259_aa hypothetical protein
1556 CAMIKB010000140.1 tRNA open 75-149 tRNA-Ile(gat)
1557 CAMIKB010000140.1 tRNA open 166-240 tRNA-Ala(tgc)
1558 CAMIKB010000140.1 GCA_946222795.1_01558 CDS open 444-1529 1086_na     361_aa hypothetical protein
1559 CAMIKB010000140.1 GCA_946222795.1_01559 CDS open 1828-4179 2352_na     783_aa topA DNA topoisomerase 1
1560 CAMIKB010000141.1 GCA_946222795.1_01560 CDS open 424-1029 606_na     201_aa hypothetical protein
1561 CAMIKB010000141.1 GCA_946222795.1_01561 CDS open 1142-4189 3048_na     1015_aa recB RecBCD enzyme subunit RecB
1562 CAMIKB010000142.1 GCA_946222795.1_01562 CDS open 343-1149 807_na     268_aa glgA Glycogen synthase
1563 CAMIKB010000142.1 GCA_946222795.1_01563 CDS open 1146-2573 1428_na     475_aa hypothetical protein
1564 CAMIKB010000142.1 GCA_946222795.1_01564 CDS open 2680-3945 1266_na     421_aa nupG Nucleoside permease NupG
1565 CAMIKB010000143.1 GCA_946222795.1_01565 CDS open 390-1211 822_na     273_aa hypothetical protein
1566 CAMIKB010000143.1 GCA_946222795.1_01566 CDS open 1313-2863 1551_na     516_aa hypothetical protein
1567 CAMIKB010000143.1 GCA_946222795.1_01567 CDS open 2875-3690 816_na     271_aa hypothetical protein
1568 CAMIKB010000143.1 GCA_946222795.1_01568 CDS open 3683-4021 339_na     112_aa ftsH ATP-dependent zinc metalloprotease FtsH
1569 CAMIKB010000144.1 GCA_946222795.1_01569 CDS open 204-2312 2109_na     702_aa dsbD_2 Thiol:disulfide interchange protein DsbD
1570 CAMIKB010000144.1 GCA_946222795.1_01570 CDS open 2338-3132 795_na     264_aa mazG Nucleoside triphosphate pyrophosphohydrolase
1571 CAMIKB010000144.1 GCA_946222795.1_01571 CDS open 3252-3506 255_na     84_aa hypothetical protein
1572 CAMIKB010000145.1 GCA_946222795.1_01572 CDS open 237-377 141_na     46_aa hypothetical protein
1573 CAMIKB010000145.1 GCA_946222795.1_01573 CDS open 1044-1169 126_na     41_aa hypothetical protein
1574 CAMIKB010000145.1 GCA_946222795.1_01574 CDS open 2253-2564 312_na     103_aa hypothetical protein
1575 CAMIKB010000145.1 GCA_946222795.1_01575 CDS open 2574-3173 600_na     199_aa hypothetical protein
1576 CAMIKB010000146.1 misc_RNA open 592-825 Cobalamin
1577 CAMIKB010000146.1 GCA_946222795.1_01577 CDS open 830-1801 972_na     323_aa eco Ecotin
1578 CAMIKB010000146.1 GCA_946222795.1_01578 CDS open 1910-3127 1218_na     405_aa bioF 8-amino-7-oxononanoate synthase
1579 CAMIKB010000147.1 GCA_946222795.1_01579 CDS open 751-1923 1173_na     390_aa hypothetical protein
1580 CAMIKB010000147.1 GCA_946222795.1_01580 CDS open 1962-3257 1296_na     431_aa agp Glucose-1-phosphatase
1581 CAMIKB010000148.1 GCA_946222795.1_01581 CDS open 319-672 354_na     117_aa hypothetical protein
1582 CAMIKB010000148.1 GCA_946222795.1_01582 CDS open 1890-2885 996_na     331_aa fda Fructose-bisphosphate aldolase
1583 CAMIKB010000149.1 GCA_946222795.1_01583 CDS open 626-1513 888_na     295_aa fabD Malonyl CoA-acyl carrier protein transacylase
1584 CAMIKB010000149.1 GCA_946222795.1_01584 CDS open 1562-3016 1455_na     484_aa pepD_2 Cytosol non-specific dipeptidase
1585 CAMIKB010000149.1 GCA_946222795.1_01585 CDS open 3056-3556 501_na     166_aa hypothetical protein
1586 CAMIKB010000150.1 GCA_946222795.1_01586 CDS open 41-1141 1101_na     366_aa hypothetical protein
1587 CAMIKB010000150.1 GCA_946222795.1_01587 CDS open 1128-1811 684_na     227_aa hypothetical protein
1588 CAMIKB010000150.1 tRNA open 1903-1975 tRNA-Arg(cct)
1589 CAMIKB010000150.1 GCA_946222795.1_01589 CDS open 2569-3456 888_na     295_aa hypothetical protein
1590 CAMIKB010000151.1 GCA_946222795.1_01590 CDS open 180-3209 3030_na     1009_aa hypothetical protein
1591 CAMIKB010000151.1 GCA_946222795.1_01591 CDS open 3228-3452 225_na     74_aa hypothetical protein
1592 CAMIKB010000152.1 GCA_946222795.1_01592 CDS open 22-2940 2919_na     972_aa secD Protein translocase subunit SecD
1593 CAMIKB010000153.1 GCA_946222795.1_01593 CDS open 53-493 441_na     146_aa kbl_2 2-amino-3-ketobutyrate coenzyme A ligase
1594 CAMIKB010000153.1 GCA_946222795.1_01594 CDS open 573-1517 945_na     314_aa putative epimerasedehydratase
1595 CAMIKB010000153.1 GCA_946222795.1_01595 CDS open 1793-3022 1230_na     409_aa putative zinc protease
1596 CAMIKB010000154.1 GCA_946222795.1_01596 CDS open 673-3420 2748_na     915_aa lacZ Beta-galactosidase
1597 CAMIKB010000155.1 GCA_946222795.1_01597 CDS open 561-2348 1788_na     595_aa lepA Elongation factor 4
1598 CAMIKB010000155.1 GCA_946222795.1_01598 CDS open 2956-3351 396_na     131_aa mutS2 Endonuclease MutS2
1599 CAMIKB010000156.1 GCA_946222795.1_01599 CDS open 53-1762 1710_na     569_aa hypothetical protein
1600 CAMIKB010000156.1 GCA_946222795.1_01600 CDS open 1772-2566 795_na     264_aa mltF_2 Membrane-bound lytic murein transglycosylase F
1601 CAMIKB010000156.1 GCA_946222795.1_01601 CDS open 2660-3241 582_na     193_aa truA tRNA pseudouridine synthase A
1602 CAMIKB010000157.1 GCA_946222795.1_01602 CDS open 612-1970 1359_na     452_aa lpd Dihydrolipoyl dehydrogenase
1603 CAMIKB010000157.1 GCA_946222795.1_01603 CDS open 2790-3212 423_na     140_aa hypothetical protein
1604 CAMIKB010000158.1 GCA_946222795.1_01604 CDS open 108-2924 2817_na     938_aa hypothetical protein
1605 CAMIKB010000159.1 GCA_946222795.1_01605 CDS open 180-1313 1134_na     377_aa tgt Queuine tRNA-ribosyltransferase
1606 CAMIKB010000159.1 GCA_946222795.1_01606 CDS open 1331-2530 1200_na     399_aa hypothetical protein
1607 CAMIKB010000159.1 GCA_946222795.1_01607 CDS open 2545-3006 462_na     153_aa smpB SsrA-binding protein
1608 CAMIKB010000160.1 GCA_946222795.1_01608 CDS open 424-1500 1077_na     358_aa hypothetical protein
1609 CAMIKB010000160.1 GCA_946222795.1_01609 CDS open 1515-2618 1104_na     367_aa pdxA2 D-threonate 4-phosphate dehydrogenase
1610 CAMIKB010000160.1 GCA_946222795.1_01610 CDS open 2891-3058 168_na     55_aa hypothetical protein
1611 CAMIKB010000161.1 GCA_946222795.1_01611 CDS open 1897-2472 576_na     191_aa hypothetical protein
1612 CAMIKB010000162.1 GCA_946222795.1_01612 CDS open 334-1236 903_na     300_aa era GTPase Era
1613 CAMIKB010000162.1 GCA_946222795.1_01613 CDS open 1330-2331 1002_na     333_aa fabH 3-oxoacyl-[acyl-carrier-protein] synthase 3
1614 CAMIKB010000162.1 GCA_946222795.1_01614 CDS open 2455-2631 177_na     58_aa rpmF 50S ribosomal protein L32
1615 CAMIKB010000162.1 GCA_946222795.1_01615 CDS open 2654-2872 219_na     72_aa hypothetical protein
1616 CAMIKB010000163.1 tRNA open 291-379 tRNA-Ser(gga)
1617 CAMIKB010000163.1 GCA_946222795.1_01617 CDS open 690-1916 1227_na     408_aa xerC Tyrosine recombinase XerC
1618 CAMIKB010000163.1 GCA_946222795.1_01618 CDS open 1949-2164 216_na     71_aa hypothetical protein
1619 CAMIKB010000163.1 GCA_946222795.1_01619 CDS open 2146-2361 216_na     71_aa hypothetical protein
1620 CAMIKB010000163.1 GCA_946222795.1_01620 CDS open 2390-2710 321_na     106_aa hypothetical protein
1621 CAMIKB010000164.1 GCA_946222795.1_01621 CDS open 164-2092 1929_na     642_aa dxs 1-deoxy-D-xylulose-5-phosphate synthase
1622 CAMIKB010000165.1 GCA_946222795.1_01622 CDS open 305-670 366_na     121_aa hypothetical protein
1623 CAMIKB010000166.1 GCA_946222795.1_01623 CDS open 363-1814 1452_na     483_aa trkH Trk system potassium uptake protein TrkH
1624 CAMIKB010000166.1 GCA_946222795.1_01624 CDS open 1836-2474 639_na     212_aa trkA Trk system potassium uptake protein TrkA
1625 CAMIKB010000167.1 GCA_946222795.1_01625 CDS open 521-2062 1542_na     513_aa rcsC Sensor histidine kinase RcsC
1626 CAMIKB010000168.1 GCA_946222795.1_01626 CDS open 884-2134 1251_na     416_aa hypothetical protein
1627 CAMIKB010000169.1 GCA_946222795.1_01627 CDS open 139-552 414_na     137_aa thyA2 Thymidylate synthase 2
1628 CAMIKB010000169.1 GCA_946222795.1_01628 CDS open 564-1055 492_na     163_aa dfrA Dihydrofolate reductase
1629 CAMIKB010000170.1 GCA_946222795.1_01629 CDS open 127-1053 927_na     308_aa oxyR Hydrogen peroxide-inducible genes activator
1630 CAMIKB010000170.1 GCA_946222795.1_01630 CDS open 1063-2043 981_na     326_aa hypothetical protein
1631 CAMIKB010000171.1 GCA_946222795.1_01631 CDS open 333-695 363_na     120_aa IS5 family transposase ISPg8
1632 CAMIKB010000171.1 GCA_946222795.1_01632 CDS open 967-1995 1029_na     342_aa czcD Cadmium%2C cobalt and zincH(+)-K(+) antiporter
1633 CAMIKB010000172.1 GCA_946222795.1_01633 CDS open 870-1406 537_na     178_aa hypothetical protein
1634 CAMIKB010000172.1 GCA_946222795.1_01634 CDS open 1746-2096 351_na     116_aa hypothetical protein
1635 CAMIKB010000174.1 GCA_946222795.1_01635 CDS open 102-1070 969_na     322_aa mshA_4 D-inositol 3-phosphate glycosyltransferase
1636 CAMIKB010000174.1 GCA_946222795.1_01636 CDS open 1083-1646 564_na     187_aa pth Peptidyl-tRNA hydrolase
1637 CAMIKB010000174.1 GCA_946222795.1_01637 CDS open 1710-2087 378_na     125_aa RutC family protein
1638 CAMIKB010000175.1 GCA_946222795.1_01638 CDS open 169-438 270_na     89_aa hypothetical protein
1639 CAMIKB010000175.1 GCA_946222795.1_01639 CDS open 518-1252 735_na     244_aa hypothetical protein
1640 CAMIKB010000175.1 GCA_946222795.1_01640 CDS open 1249-1998 750_na     249_aa hypothetical protein
1641 CAMIKB010000176.1 GCA_946222795.1_01641 CDS open 102-596 495_na     164_aa hypothetical protein
1642 CAMIKB010000177.1 tRNA open 669-754 tRNA-Ser(tga)
1643 CAMIKB010000177.1 GCA_946222795.1_01643 CDS open 1005-1943 939_na     312_aa hypothetical protein
1644 CAMIKB010000178.1 GCA_946222795.1_01644 CDS open 847-1614 768_na     255_aa hypothetical protein
1645 CAMIKB010000181.1 GCA_946222795.1_01645 CDS open 230-1570 1341_na     446_aa dgt Deoxyguanosinetriphosphate triphosphohydrolase
1646 CAMIKB010000182.1 GCA_946222795.1_01646 CDS open 331-1383 1053_na     350_aa nusB Transcription antitermination protein NusB
1647 CAMIKB010000183.1 GCA_946222795.1_01647 CDS open 168-323 156_na     51_aa hypothetical protein
1648 CAMIKB010000184.1 GCA_946222795.1_01648 CDS open 46-390 345_na     114_aa hypothetical protein
1649 CAMIKB010000184.1 GCA_946222795.1_01649 CDS open 482-1444 963_na     320_aa Hydroxypyruvate reductase
1650 CAMIKB010000185.1 GCA_946222795.1_01650 CDS open 536-1507 972_na     323_aa hypothetical protein
1651 CAMIKB010000186.1 GCA_946222795.1_01651 CDS open 17-577 561_na     186_aa cobC Adenosylcobalaminalpha-ribazole phosphatase
1652 CAMIKB010000186.1 GCA_946222795.1_01652 CDS open 581-1153 573_na     190_aa gmk Guanylate kinase
1653 CAMIKB010000186.1 GCA_946222795.1_01653 CDS open 1192-1584 393_na     130_aa recA Protein RecA
1654 CAMIKB010000187.1 GCA_946222795.1_01654 CDS open 355-1527 1173_na     390_aa mnmA tRNA-specific 2-thiouridylase MnmA
1655 CAMIKB010000188.1 GCA_946222795.1_01655 CDS open 251-511 261_na     86_aa hypothetical protein
1656 CAMIKB010000188.1 GCA_946222795.1_01656 CDS open 471-1487 1017_na     338_aa dnaC Replicative DNA helicase