Genome Meta Information: Streptococcus sanguinis VMC66 (GCA_000188275.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000188275.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis VMC66 | ||
| Strain or Isolate | VMC66 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis_H |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 42.7 | ||
| Contigs |
|
||
| Total Sequence Length | 2,319,451 (bp) | ||
| GC Percentage | 43.48 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/275/GCA_000188275.1_ASM18827v1 | ||
| CDS | 2213 | ||
| Genes | 2297 | ||
| mRNA | 2297 | ||
| misc RNA | 32 | ||
| rRNA | 4 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.13 % | ||
| CheckM Completeness | 99.37 % | ||
| CheckM Contamination | 0.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM18827v1 |
| GenBank Assembly Accession | GCA_000188275.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000188275.1 [NCBI] |
| BioSample | SAMN00253296 [NCBI] |
| BioProject | PRJNA53191 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-03-26T14:33:06.723 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AEVH01 |
| NCBI TaxID | 888825 |
| Isolation Source | blood |
| Geo Location | not determined |
