Genome Meta Information: Streptococcus sanguinis SK1058 (GCA_000195125.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000195125.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis SK1058 | ||
| Strain or Isolate | SK1058 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 25.76 | ||
| Contigs |
|
||
| Total Sequence Length | 2,352,829 (bp) | ||
| GC Percentage | 43.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/125/GCA_000195125.1_ASM19512v1 | ||
| CDS | 2262 | ||
| Genes | 2332 | ||
| mRNA | 2332 | ||
| misc RNA | 30 | ||
| rRNA | 3 | ||
| tRNA | 36 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.02 % | ||
| CheckM Completeness | 98.83 % | ||
| CheckM Contamination | 0.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM19512v1 |
| GenBank Assembly Accession | GCA_000195125.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000195125.1 [NCBI] |
| BioSample | SAMN00253321 [NCBI] |
| BioProject | PRJNA53185 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-03-27T15:52:06.110 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AFBF01 |
| NCBI TaxID | 888822 |
| Isolation Source | |
| Geo Location | not determined |
