Genome Meta Information: Streptococcus sanguinis SK1087 (GCA_000204475.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000204475.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis SK1087 | ||
| Strain or Isolate | SK1087 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis_R |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 27.08 | ||
| Contigs |
|
||
| Total Sequence Length | 2,315,021 (bp) | ||
| GC Percentage | 43.33 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/475/GCA_000204475.1_ASM20447v1 | ||
| CDS | 2232 | ||
| Genes | 2308 | ||
| mRNA | 2308 | ||
| misc RNA | 26 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.1 % | ||
| CheckM Completeness | 98.49 % | ||
| CheckM Contamination | 0.5 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM20447v1 |
| GenBank Assembly Accession | GCA_000204475.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000204475.1 [NCBI] |
| BioSample | SAMN00253322 [NCBI] |
| BioProject | PRJNA53189 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2011-03-27T15:58:05.680 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AFDP01 |
| NCBI TaxID | 888824 |
| Isolation Source | |
| Geo Location | not determined |
