Genome Meta Information: Streptococcus sanguinis 2908 (GCA_001078705.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001078705.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis 2908 | ||
| Strain or Isolate | 2908 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis_D |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,308,610 (bp) | ||
| GC Percentage | 43.34 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/705/GCA_001078705.1_Streptococcus_sanguinis_2908 | ||
| CDS | 2216 | ||
| Genes | 2309 | ||
| mRNA | 2309 | ||
| misc RNA | 28 | ||
| rRNA | 7 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.31 % | ||
| CheckM Completeness | 97.87 % | ||
| CheckM Contamination | 0.21 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Streptococcus sanguinis 2908 |
| GenBank Assembly Accession | GCA_001078705.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001078705.1 [NCBI] |
| BioSample | SAMEA3207422 [NCBI] |
| BioProject | PRJEB7884 [NCBI] |
| Submitter | IMPERIAL COLLEGE LONDON |
| Submission Date | 2015-01-29T08:52:43.370 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | CDMW01 |
| NCBI TaxID | 1305 |
| Isolation Source | human throat |
| Geo Location | Norway |
