Genome Meta Information: Streptococcus sanguinis UMB0028 (GCA_002860765.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002860765.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis UMB0028 | ||
| Strain or Isolate | UMB0028 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 309.52 | ||
| Contigs |
|
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| Total Sequence Length | 2,431,001 (bp) | ||
| GC Percentage | 43.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/860/765/GCA_002860765.1_ASM286076v1 | ||
| CDS | 2343 | ||
| Genes | 2436 | ||
| mRNA | 2436 | ||
| misc RNA | 31 | ||
| rRNA | 8 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 86.61 % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM286076v1 |
| GenBank Assembly Accession | GCA_002860765.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002860765.1 [NCBI] |
| BioSample | SAMN08193733 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-12-16T21:05:06.237 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PKHZ01 |
| NCBI TaxID | 1304 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
