Genome Meta Information: Streptococcus sanguinis KLC04 (GCA_003944465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003944465.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis KLC04 | ||
| Strain or Isolate | KLC04 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis_F |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 307 | ||
| Contigs |
|
||
| Total Sequence Length | 2,366,195 (bp) | ||
| GC Percentage | 43.12 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/944/465/GCA_003944465.1_ASM394446v1 | ||
| CDS | 2230 | ||
| Genes | 2336 | ||
| mRNA | 2336 | ||
| misc RNA | 56 | ||
| rRNA | 4 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.48 % | ||
| CheckM Completeness | 99.46 % | ||
| CheckM Contamination | 1.75 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM394446v1 |
| GenBank Assembly Accession | GCA_003944465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003944465.1 [NCBI] |
| BioSample | SAMN09631780 [NCBI] |
| BioProject | PRJNA480251 [NCBI] |
| Submitter | Clemson University |
| Submission Date | 2018-07-09T11:29:06.057 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | RJMK01 |
| NCBI TaxID | 1305 |
| Isolation Source | dental plaque |
| Geo Location | USA: Florida |
