Genome Meta Information: Streptococcus sanguinis CGMH010 (GCA_013378335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013378335.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis CGMH010 | ||
| Strain or Isolate | CGMH010 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis_I |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 190 | ||
| Contigs |
|
||
| Total Sequence Length | 2,349,491 (bp) | ||
| GC Percentage | 42.81 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/378/335/GCA_013378335.1_ASM1337833v1 | ||
| CDS | 2346 | ||
| Genes | 2453 | ||
| mRNA | 2453 | ||
| misc RNA | 35 | ||
| rRNA | 12 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.84 % | ||
| CheckM Completeness | 94.51 % | ||
| CheckM Contamination | 1.13 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1337833v1 |
| GenBank Assembly Accession | GCA_013378335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN11812007 [NCBI] |
| BioProject | PRJNA544156 [NCBI] |
| Submitter | Chang Gung University |
| Submission Date | 2019-05-22T01:09:03.707 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1305 |
| Isolation Source | blood |
| Geo Location | Taiwan: Taoyuan |
