Genome Meta Information: Streptococcus sanguinis CGMH058 (GCA_013378355.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013378355.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis CGMH058 | ||
| Strain or Isolate | CGMH058 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis_I |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 254 | ||
| Contigs |
|
||
| Total Sequence Length | 2,342,565 (bp) | ||
| GC Percentage | 42.95 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/378/355/GCA_013378355.1_ASM1337835v1 | ||
| CDS | 2317 | ||
| Genes | 2446 | ||
| mRNA | 2446 | ||
| misc RNA | 56 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.78 % | ||
| CheckM Completeness | 95.24 % | ||
| CheckM Contamination | 1.14 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1337835v1 |
| GenBank Assembly Accession | GCA_013378355.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013378355.1 [NCBI] |
| BioSample | SAMN11579693 [NCBI] |
| BioProject | PRJNA541204 [NCBI] |
| Submitter | Chang Gung University |
| Submission Date | 2019-05-06T03:07:03.933 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1305 |
| Isolation Source | blood specimen |
| Geo Location | Taiwan:Taoyuan city |
