Genome Meta Information: Streptococcus sanguinis CR29 (GCA_020729725.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_020729725.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis CR29 | ||
| Strain or Isolate | CR29 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis_V |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 180 | ||
| Contigs |
|
||
| Total Sequence Length | 2,486,308 (bp) | ||
| GC Percentage | 42.97 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/729/725/GCA_020729725.1_ASM2072972v1 | ||
| CDS | 2405 | ||
| Genes | 2496 | ||
| mRNA | 2496 | ||
| misc RNA | 29 | ||
| rRNA | 5 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.05 % | ||
| CheckM Completeness | 99.6 % | ||
| CheckM Contamination | 0.66 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2072972v1 |
| GenBank Assembly Accession | GCA_020729725.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_020729725.1 [NCBI] |
| BioSample | SAMN20399948 [NCBI] |
| BioProject | PRJNA749742 [NCBI] |
| Submitter | Institute for Genome Sciences, University of Maryland, Baltimore |
| Submission Date | 2021-07-26T13:03:06.507 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAJEPA01 |
| NCBI TaxID | 1305 |
| Isolation Source | dental plaque |
| Geo Location | USA: Buffalo, NY |
