Genome Meta Information: Streptococcus sanguinis A12068223 (GCA_026781665.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_026781665.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis A12068223 | ||
| Strain or Isolate | A12068223 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis_W |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 95.18 | ||
| Contigs |
|
||
| Total Sequence Length | 2,330,966 (bp) | ||
| GC Percentage | 43.18 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/781/665/GCA_026781665.1_ASM2678166v1 | ||
| CDS | 2243 | ||
| Genes | 2326 | ||
| mRNA | 2326 | ||
| misc RNA | 30 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.32 % | ||
| CheckM Completeness | 99.27 % | ||
| CheckM Contamination | 0.31 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2678166v1 |
| GenBank Assembly Accession | GCA_026781665.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_026781665.1 [NCBI] |
| BioSample | SAMN26135090 [NCBI] |
| BioProject | PRJNA808899 [NCBI] |
| Submitter | Region Zealand |
| Submission Date | 2022-02-21T10:09:06.810 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAKUVI01 |
| NCBI TaxID | 1305 |
| Isolation Source | blood |
| Geo Location | Denmark:Copenhagen |
