Genome Meta Information: Streptococcus sanguinis NCTC11085 (GCA_900475045.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900475045.1 | ||
| HOMD Taxon-ID | HMT-0758 | ||
| Species Name (in use by HOMD) | Streptococcus sanguinis | ||
| Organism Name (as deposited) | HMT-758 Streptococcus sanguinis NCTC11085 | ||
| Strain or Isolate | NCTC11085 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sanguinis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,449,527 (bp) | ||
| GC Percentage | 42.96 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/475/045/GCA_900475045.1_42290_B02 | ||
| CDS | 2318 | ||
| Genes | 2423 | ||
| mRNA | 2423 | ||
| misc RNA | 32 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.37 % | ||
| CheckM Completeness | 99.52 % | ||
| CheckM Contamination | 0.45 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 42290_B02 |
| GenBank Assembly Accession | GCA_900475045.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900475045.1 [NCBI] |
| BioSample | SAMEA3632064 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-01-20T08:08:20.780 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1305 |
| Isolation Source | throat |
| Geo Location | Norway: Oslo |
