HOMD ::Species:Actinomyces sp. HMT-448

Species: Actinomyces sp. HMT-448 (HMT-0448) Primary Body Site: Oral

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Actinomycetales; Actinomycetaceae; Actinomyces; Actinomyces sp. HMT-448

LINKS: Ecology Home | HMT-0448: [Body Sites Data] [Taxon Description] | Life Page: Actinomyces sp. HMT-448

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Actinomyces sp. HMT-448

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.89	0.88	0.98	0.01	0.04	0	0.04	0	0	0	0.01	0.01	0	0.09	0	0.01	0.01	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0.01	0	0	0	0	0	0	0	0	0	0	0.09	0	0	0	0
90^thp	0.67	2.56	2.96	0.02	0.04	0	0.10	0	0	0	0.01	0.01	0	0.09	0	0.02	0	0
Stdev	3.57	2.46	1.80	0.01	0.23	0	0.11	0	0	0	0.02	0.01	0	0	0	0.02	0.06	0.04
Prev(%)	33.33	37.97	41.67	0	2.48	0	0	0	0	0	0	0	0	0	0	0	1.06	0.27

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.61	0.23	0	0.01	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.36	0.52	0	0	0	0	0	0	0	0
Stdev	3.08	0.58	0.01	0.05	0.01	0.01	0.01	0.01	0	0
Prev(%)	27.27	33.77	3.90	9.09	5.20	7.79	6.49	1.30	1.30	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.19	0.11	0	0.01	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.38	0.29	0	0	0	0	0	0	0	0
Stdev	0.88	0.42	0.01	0.03	0	0.01	0	0	0	0
Prev(%)	28.38	29.05	1.35	8.11	2.03	6.76	2.03	2.03	2.03	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.56	0.28	0	0.06	0	0	0	0	0	0	0	0	0	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.51	0.90	0	0.01	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	2.60	0.83	0	0.61	0	0	0	0	0	0	0	0	0	0.06	0	0	0	0
Prev(%)	32.45	35.76	0	10.27	0	0	0	0	0	0	0	0	0	5.99	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.41	0.21	0	0.03	0	0	0	0	0	0	0	0.02	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.77	0.48	0	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	1.76	0.76	0	0.12	0	0	0	0	0	0	0	0.21	0	0	0	0	0	0
Prev(%)	36.30	31.95	0	11.41	0	0	0	0	0	0	0	2.78	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.63	0.90	0.06	0.02	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.58	2.63	0.08	0.07	0.01	0.01	0	0	0	0
Stdev	2.32	2.41	0.29	0.05	0.01	0.01	0.01	0	0	0
Prev(%)	45.95	67.65	34.88	45.71	25.00	28.00	15.15	16.13	0	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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