HOMD ::Genus:Arachnia

Genus: Arachnia

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales; Propionibacteriaceae; Arachnia
Lower rank member(s): [Species:Arachnia propionica] [Species:Arachnia rubra]

LINKS: Ecology Home | Life Page: Arachnia

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Arachnia

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	2.81	1.51	0.87	0.15	0.04	0	0.04	0.01	0	0.01	0.02	0.02	0.10	0.14	0	0.03	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.02	0.03	0.01	0	0	0	0.01	0	0	0	0	0	0	0.14	0	0	0	0
90^thp	7.49	3.42	1.33	0.02	0.08	0	0.07	0.02	0	0.01	0.06	0.06	0.01	0.14	0	0.06	0.01	0
Stdev	4.34	2.56	2.60	0.56	0.11	0	0.04	0.02	0	0.04	0.03	0.03	0.55	0	0	0.06	0.02	0
Prev(%)	79.17	89.37	66.67	13.33	5.88	0	0	14.29	0	2.60	0	4.35	3.33	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.72	0.90	0.01	0.04	0.01	0.02	0.01	0.01	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	2.00	2.83	0.02	0.07	0.04	0.07	0	0.01	0	0
Stdev	0.96	1.49	0.05	0.15	0.03	0.06	0.03	0.03	0.01	0
Prev(%)	83.12	84.42	15.58	33.77	20.78	25.97	7.79	10.39	7.79	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.57	0.63	0.01	0.02	0.02	0.02	0.01	0.01	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.58	1.47	0	0.06	0.03	0.06	0.02	0.02	0	0
Stdev	0.87	1.18	0.09	0.05	0.11	0.04	0.05	0.03	0.01	0.01
Prev(%)	83.78	85.81	4.05	26.35	20.95	29.73	12.16	12.16	3.38	2.10

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.05	0.86	0.03	0.01	0	0	0.01	0	0	0	0.01	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.89	2.25	0	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	1.81	1.43	0.20	0.09	0	0	0.20	0	0	0	0.13	0	0	0	0	0	0	0
Prev(%)	90.07	88.74	9.09	17.81	0	0	3.87	0	0	0	2.59	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.81	0.83	0.03	0.02	0.01	0	0.02	0	0	0	0.03	0.02	0.10	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.22	2.26	0.06	0.06	0.03	0	0	0	0	0	0	0	0.01	0	0	0	0	0
Stdev	1.24	1.39	0.14	0.09	0.04	0	0.14	0	0	0	0.42	0.21	0.98	0	0	0	0	0
Prev(%)	93.33	89.02	14.57	24.32	15.09	0	7.79	0	0	0	5.41	5.25	11.03	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.48	0.41	0.05	0.02	0.04	0.01	0.01	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.33	1.13	0.02	0.04	0.10	0.01	0.01	0	0	0
Stdev	1.03	0.84	0.24	0.02	0.07	0.01	0.02	0	0.01	0
Prev(%)	81.08	82.35	51.16	65.71	57.14	56.00	33.33	25.81	22.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	3.56	1.91	1.08	0.22	0.04	0	0.01	0	0	0	0.01	0	0.18	0.01	0	0.01	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0.03	0	0	0	0	0	0	0	0	0	0	0	0.01	0	0	0	0
90^thp	9.04	4.68	1.36	0.35	0.09	0	0.02	0	0	0	0	0	0	0.01	0	0.01	0	0
Stdev	5.18	3.09	3.42	0.71	0.14	0	0.03	0.01	0	0.04	0.06	0.02	1.00	0	0	0.02	0.01	0
Prev(%)	87.50	93.43	75.00	29.41	19.95	0	12.50	6.25	0	3.99	2.70	8.33	3.13	100.00	0	14.29	0.51	0.18

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