HOMD ::Species:Arachnia propionica

Species: Arachnia propionica (HMT-0739) Primary Body Site: Oral

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales; Propionibacteriaceae; Arachnia; Arachnia propionica

LINKS: Ecology Home | HMT-0739: [Body Sites Data] [Taxon Description] | Life Page: Arachnia propionica

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Arachnia propionica

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.82	0.64	0.84	0.01	0.02	0	0.02	0.01	0	0	0.01	0.01	0.10	0.10	0	0	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.02	0.03	0.01	0	0	0	0.01	0	0	0	0	0	0	0.10	0	0	0	0
90^thp	1.25	1.44	1.31	0.02	0.04	0	0.03	0.02	0	0	0.02	0.02	0	0.10	0	0.01	0	0
Stdev	1.42	0.89	2.53	0.03	0.03	0	0.01	0.02	0	0.01	0.01	0.01	0.52	0	0	0.01	0.01	0
Prev(%)	79.17	87.09	66.67	6.67	2.79	0	0	14.29	0	1.42	0	4.35	3.33	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.46	0.45	0.01	0.01	0.01	0.01	0.01	0.01	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.36	1.22	0	0.03	0.02	0.03	0	0	0	0
Stdev	0.65	0.65	0.04	0.06	0.02	0.02	0.02	0.03	0.01	0
Prev(%)	80.52	79.22	10.39	24.68	15.58	16.88	6.49	6.49	6.49	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

Notes:
Reads equally close to A. propionica and A. rubra were assigned half to each taxon.

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.28	0.31	0.01	0.01	0.01	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.79	0.74	0	0.03	0.01	0.03	0.01	0.01	0	0
Stdev	0.43	0.59	0.04	0.03	0.05	0.02	0.03	0.02	0	0
Prev(%)	83.78	85.81	4.05	26.35	20.95	29.73	12.16	12.16	3.38	2.10

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.54	0.41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.40	1.13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.82	0.66	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	86.75	86.75	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.47	0.36	0	0	0	0	0	0	0	0	0	0.02	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.40	0.97	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.70	0.52	0	0	0	0	0	0	0	0	0	0.21	0	0	0	0	0	0
Prev(%)	91.36	85.37	0	0	0	0	0	0	0	0	0	5.25	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.22	0.20	0.04	0.01	0.03	0	0.01	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.61	0.45	0.02	0.02	0.10	0.01	0.01	0	0	0
Stdev	0.41	0.37	0.24	0.01	0.07	0.01	0.02	0	0	0
Prev(%)	79.73	82.35	46.51	60.00	57.14	42.00	30.30	19.36	10.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.45	0.47	0.32	0	0	0	0	0	0	0	0	0	0.02	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.01	0	0	0	0	0	0	0	0	0	0	0	0.01	0	0	0	0
90^thp	1.21	0.98	0.92	0.01	0	0	0	0	0	0	0	0	0	0.01	0	0	0	0
Stdev	0.71	0.76	0.57	0.01	0.02	0	0	0.01	0	0.01	0.02	0	0.12	0	0	0	0	0
Prev(%)	83.33	89.90	66.67	11.77	5.32	0	0	6.25	0	1.17	0.45	4.17	3.13	100.00	0	7.14	0	0

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