HOMD ::Species:Johnsonella ignava

Species: Johnsonella ignava (HMT-0635) Primary Body Site: Oral

Download Options

Full Lineage: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Johnsonella; Johnsonella ignava

LINKS: Ecology Home | HMT-0635: [Body Sites Data] [Taxon Description] | Life Page: Johnsonella ignava

Hide Legend

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Johnsonella ignava

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.10	0.03	0.06	0	0	0	0.02	0.01	0.02	0.01	0.01	0	0	0.01	0	0	0	0.08
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0.01	0	0	0	0.01	0.01	0	0	0	0	0	0.01	0	0	0	0.01
90^thp	0.41	0.07	0.10	0.01	0.01	0	0.05	0.02	0.03	0.02	0.01	0	0	0.01	0	0.01	0.01	0.20
Stdev	0.17	0.05	0.07	0	0.01	0	0.03	0.01	0.02	0.01	0.02	0	0	0	0	0.01	0.01	0.10
Prev(%)	16.67	14.94	4.17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.03	0.01	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.07	0.03	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.10	0.05	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	29.80	18.54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.06	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.16	0.05	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.19	0.06	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	28.64	19.51	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.16	0.01	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.24	0.04	0	0.01	0	0	0	0	0	0
Stdev	0.60	0.03	0	0.01	0	0	0	0	0	0
Prev(%)	37.84	32.35	23.26	22.86	21.43	12.00	9.09	0	7.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.09	0.02	0.02	0	0	0	0.01	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.44	0.07	0.04	0	0	0	0.04	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.19	0.07	0.06	0	0	0	0.03	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	33.33	20.20	16.67	0	0	0	25.00	0	0	0.23	0	0	0	0	0	0	0	0

Copyright 2007-2025, The Forsyth Institute
Hosted on Amazon AWS EC2

Body Site Legend: