HOMD ::Species:Lawsonella clevelandensis

Species: Lawsonella clevelandensis (HMT-0173) Primary Body Site: Nasal

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Lawsonellaceae; Lawsonella; Lawsonella clevelandensis

LINKS: Ecology Home | HMT-0173: [Body Sites Data] [Taxon Description] | Life Page: Lawsonella clevelandensis

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Lawsonella clevelandensis

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0	0	0	0	0.88	0.05	0.07	0.23	0.19	0	0.02	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0	0	0	0	0	0.01	0	0.23	0.01	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	2.40	0.12	0.12	0.23	0.43	0.01	0	0
Stdev	0	0	0	0	0	0	0	0	0	0	1.55	0.06	0.11	0	0.25	0.01	0.12	0
Prev(%)	0	0	0	0	0	0	0	0	0	0	7.69	0	0	0	25.00	0	3.19	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0.01	0	0	5.44	0.49	0.60	1.47	1.88	0.06	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	15.54	1.55	1.33	3.49	5.21	0.17	0	0	0
Stdev	0.01	0	0	0	0	0	0.07	0	0	7.15	0.78	1.92	2.25	3.49	0.18	0	0	0
Prev(%)	6.62	0	0	0	0	0	5.06	0	0	86.67	79.60	79.04	75.29	79.26	52.11	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0.01	0.01	0	0.01	0	0.02	0	0.02	3.25	0.24	0.54	0.57	1.10	0.03	0.01	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	7.69	0.73	0.96	1.74	2.72	0.06	0.01	0	0
Stdev	0.09	0.10	0.09	0.03	0.06	0	0.21	0	0.26	4.90	0.44	2.30	0.86	2.74	0.09	0.06	0.10	0
Prev(%)	1.24	2.19	2.22	2.98	3.84	0	4.36	0	1.70	86.97	70.70	69.44	66.21	72.00	24.14	14.21	3.67	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0	0	0	0	0	0.01	0	0.02
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0.07
Stdev	0	0	0	0	0	0	0.01	0.02	0	0.04
Prev(%)	2.70	2.94	2.33	8.57	7.14	2.00	6.06	12.90	0	40.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0	0	0	0	0.02	0	0	0	0	0	0.06	0
Prev(%)	0	0	0	0	0	0	0	0	0	0	0.90	0	0	0	0	0	1.51	0

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