HOMD ::Genus:Oribacterium

Genus: Oribacterium

Full Lineage: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Oribacterium
Lower rank member(s): [Species:Oribacterium asaccharolyticum] [Species:Oribacterium parvum] [Species:Oribacterium sinus] [Species:Oribacterium sp. HMT-078] [Species:Oribacterium sp. HMT-102]

LINKS: Ecology Home | Life Page: Oribacterium

Hide Legend

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Oribacterium

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.10	0.03	0.27	0.03	0.12	0.22	1.45	1.71	0.93	1.07	0.06	0.01	0	0.07	0	0.01	0.02	0.05
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0	0.03	0.01	0.02	0.22	0.49	1.20	0.30	0.37	0	0	0	0.07	0	0	0	0.01
90^thp	0.15	0.07	0.58	0.05	0.29	0.22	2.67	2.27	1.54	1.92	0.06	0.01	0.01	0.07	0.01	0.02	0.02	0.10
Stdev	0.14	0.10	0.23	0.04	0.21	0	1.30	0.56	0.59	0.67	0.22	0.02	0.01	0	0.01	0.01	0.14	0.10
Prev(%)	45.83	17.22	58.33	13.33	13.62	100.00	87.50	100.00	86.36	99.29	3.08	0	0	0	0	12.50	1.06	0.53

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.06	0.05	0.02	0.15	0.57	2.25	1.22	0.97	1.22	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.09	0.31	0.22	0.19	0.28	0
90^thp	0.17	0.10	0.06	0.40	1.09	4.58	3.00	1.96	2.44	0
Stdev	0.12	0.14	0.04	0.23	0.54	2.55	1.07	0.73	0.86	0.01
Prev(%)	50.65	46.75	35.06	71.43	100.00	94.81	96.10	100.00	97.40	5.20

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.11	0.07	0.04	0.29	0.89	2.86	1.47	1.24	1.45	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.18	0.66	0.37	0.25	0.43	0
90^thp	0.33	0.22	0.08	0.71	1.79	6.19	3.09	2.27	2.68	0
Stdev	0.23	0.15	0.15	0.44	0.81	3.03	1.18	0.94	0.99	0
Prev(%)	61.49	47.30	34.46	87.84	97.97	100.00	97.97	98.65	99.32	1.40

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.06	0	0.03	0.15	0.69	2.57	1.16	1.03	1.26	0	0.07	0	0.03	0.07	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.10	0.27	0.24	0.33	0.37	0	0	0	0	0	0	0	0	0
90^thp	0.11	0	0.06	0.44	1.39	5.55	2.32	1.85	2.39	0	0	0	0.04	0.06	0	0	0	0
Stdev	0.33	0	0.06	0.26	0.70	3.52	0.96	0.66	0.86	0	1.21	0	0.18	0.33	0	0	0	0
Prev(%)	46.36	0	47.55	73.97	98.66	94.61	97.02	99.33	99.36	0	8.62	0	12.07	14.29	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.13	0.02	0	0.39	1.58	3.91	2.02	1.75	2.14	0	0	0	0	0.22	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.32	0.87	0.28	0.40	0.60	0	0	0	0	0	0	0	0	0
90^thp	0.31	0.07	0	1.03	2.91	8.17	4.16	3.31	4.03	0	0	0	0	0.24	0	0	0	0
Stdev	0.28	0.06	0	0.57	1.27	4.04	1.67	1.53	1.47	0	0	0	0	0.81	0	0	0	0
Prev(%)	64.94	26.83	0	81.14	96.93	99.41	96.26	99.03	99.76	0	0	0	0	22.00	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.22	0.12	0.08	0.15	0.36	0.39	0.79	0.71	0.64	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.03	0	0.03	0.05	0.01	0
90^thp	0.50	0.18	0.20	0.41	0.69	0.89	2.02	1.67	1.16	0
Stdev	0.58	0.29	0.12	0.23	0.66	0.44	0.94	1.03	1.01	0
Prev(%)	86.49	76.47	72.09	82.86	100.00	90.00	100.00	96.77	95.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.09	0.03	0.25	0.01	0.11	0.26	1.46	0.98	0.85	1.22	0.01	0	0	0	0	0	0.01	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.26	0.56	0	0.03	0.38	0	0	0	0	0	0	0	0
90^thp	0.14	0.06	0.61	0.03	0.30	0.26	2.73	2.27	1.48	2.18	0	0	0	0	0	0	0	0
Stdev	0.15	0.13	0.26	0.03	0.28	0	1.32	1.00	0.72	0.78	0.14	0	0	0	0	0.01	0.09	0.08
Prev(%)	62.50	27.02	83.33	29.41	44.41	100.00	100.00	68.75	92.00	99.30	0.90	0	0	0	0	7.14	0.51	0.73

Copyright 2007-2025, The Forsyth Institute
Hosted on Amazon AWS EC2

Body Site Legend: