HOMD ::Species:Oribacterium sp. HMT-078

Species: Oribacterium sp. HMT-078 (HMT-0078) Primary Body Site: Oral

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Full Lineage: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Oribacterium; Oribacterium sp. HMT-078

LINKS: Ecology Home | HMT-0078: [Body Sites Data] [Taxon Description] | Life Page: Oribacterium sp. HMT-078

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Oribacterium sp. HMT-078

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.09	0.02	0.21	0	0.01	0	0.01	0	0.12	0	0	0	0	0	0	0	0	0.01
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0.01	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.14	0.05	0.46	0.01	0.02	0	0.01	0.01	0.01	0.01	0	0	0	0	0	0	0	0.01
Stdev	0.14	0.04	0.21	0.01	0.03	0	0.01	0	0.55	0	0	0	0	0	0	0	0	0.01
Prev(%)	37.50	13.67	58.33	0	0.62	0	0	0	4.55	0	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.09	0.04	0	0.02	0.01	0.01	0.01	0.02	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.25	0.16	0	0.05	0.02	0.06	0	0.04	0	0
Stdev	0.15	0.10	0	0.04	0.04	0.03	0.06	0.07	0.01	0
Prev(%)	54.05	33.11	2.03	25.00	11.49	23.65	9.46	19.59	5.41	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.06	0	0	0	0	0	0.01	0.03	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.11	0	0	0	0	0	0	0.02	0	0	0	0	0	0	0	0	0	0
Stdev	0.33	0	0	0	0	0	0.07	0.21	0	0	0	0	0	0	0	0	0	0
Prev(%)	46.36	0	0	0	0	0	5.95	14.67	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.11	0.02	0	0.02	0	0	0	0.02	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.28	0.07	0	0.06	0	0	0	0.03	0	0	0	0	0	0	0	0	0	0
Stdev	0.26	0.06	0	0.08	0	0	0	0.12	0	0	0	0	0	0	0	0	0	0
Prev(%)	54.57	26.83	0	20.35	0	0	0	18.25	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.21	0.10	0.01	0.02	0.01	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.50	0.16	0.01	0.05	0.02	0.01	0	0.01	0	0
Stdev	0.58	0.29	0.02	0.06	0.01	0.01	0	0	0	0
Prev(%)	75.68	64.71	23.26	45.71	32.14	48.00	15.15	29.03	7.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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