HOMD ::Species:Peptidiphaga sp. HMT-183

Species: Peptidiphaga sp. HMT-183 (HMT-0183) Primary Body Site: Oral

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Actinomycetales; Actinomycetaceae; Peptidiphaga; Peptidiphaga sp. HMT-183

LINKS: Ecology Home | HMT-0183: [Body Sites Data] [Taxon Description] | Life Page: Peptidiphaga sp. HMT-183

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Peptidiphaga sp. HMT-183

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	2.21	1.74	1.87	0.02	0.17	0	0.05	0	0	0	0.03	0.02	0	0.05	0	0.53	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.03	0	0.01	0	0	0	0.01	0	0	0	0	0	0	0.05	0	0	0	0
90^thp	6.30	5.02	5.16	0.02	0.14	0	0.12	0	0.01	0.01	0.05	0.03	0.01	0.05	0	1.39	0.01	0
Stdev	2.70	3.05	4.32	0.05	1.27	0	0.07	0	0	0.01	0.07	0.03	0.01	0	0	1.39	0.01	0.01
Prev(%)	75.00	78.73	45.83	0	8.98	0	0	0	0	4.02	0	0	0	0	0	12.50	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.52	0.50	0	0.11	0	0.03	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.71	1.07	0	0.05	0	0.04	0	0	0	0
Stdev	1.16	0.98	0.01	0.84	0.01	0.11	0.01	0.01	0	0
Prev(%)	64.94	63.64	7.79	16.88	10.39	19.48	7.79	3.90	1.30	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.53	0.50	0.04	0.04	0.01	0.01	0.01	0.01	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.39	1.31	0	0.07	0.02	0.04	0.02	0.02	0	0
Stdev	1.24	0.89	0.42	0.23	0.09	0.04	0.02	0.02	0.01	0
Prev(%)	67.57	68.92	5.41	24.32	15.54	22.97	14.19	10.81	4.05	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.64	0.67	0.04	0.09	0	0	0	0	0	0	0.02	0.01	0	0.03	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.70	2.19	0.03	0.11	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	1.55	1.79	0.30	0.70	0	0	0	0	0	0	0.19	0.12	0	0.26	0	0	0	0
Prev(%)	69.54	67.55	16.08	29.45	0	0	0	0	0	0	5.46	5.38	0	5.53	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.60	0.67	0.04	0.07	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.63	1.53	0.02	0.11	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	1.33	1.83	0.32	0.54	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	75.06	69.51	11.11	26.30	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.27	0.48	0.01	0.01	0.01	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.51	1.22	0.01	0.01	0.02	0.01	0.01	0	0	0
Stdev	0.67	0.95	0.02	0.02	0.02	0.01	0	0	0	0
Prev(%)	72.97	82.35	25.58	45.71	35.71	26.00	18.18	16.13	5.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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