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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Species: Rothia mucilaginosa

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Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae; Rothia; Rothia mucilaginosa

Lower rank member(s): [Subspecies:clade-147] [Subspecies:clade-681]
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Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Available Datasets:
 HMP Mapping  ND:Erenv1v3  ND:Erenv3v5  ND:HMPv1v3  ND:HMPv3v5  HMP Metaphlan  ND:Dewhirst35x9
No Available Datasets for Species: Rothia mucilaginosa
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
Notes:
has subspecies


SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.140.130.120.183.0812.061.111.071.325.430.150.050.021.8200.100.010.02
n2439524153231872242365233014894375
10thp0.010.01000.0912.060.300.410.260.820.01001.820000
90thp0.360.230.440.578.8912.062.641.633.2312.030.310.110.041.8200.240.020.01
Stdev0.240.360.290.245.0501.140.551.125.780.280.080.03000.270.040.24
Prev(%)33.3331.9016.6753.3381.73100.0075.00100.0095.4599.533.0813.0410.000012.5001.07
Eren V1-V3 www.pnas.org (Data from healthy subjects.)
No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)
No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
Notes:
has subspecies


SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.090.080.080.203.499.540.900.670.934.890.120.010.010.940.010.040.050.01
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp00000.059.540.090.030.100.640000.940000
90thp0.220.130.320.8210.579.542.201.582.5611.220.030.030.020.940000
Stdev0.210.330.200.335.7901.130.750.955.830.720.040.0200.040.150.560.18
Prev(%)45.8342.4229.1758.8294.68100.00100.0087.5092.0099.3014.4137.5021.88100.009.097.145.051.27