HOMD ::Genus:Ruminococcaceae [G2]

Genus: Ruminococcaceae [G2]

Full Lineage: Bacteria; Bacillota; Clostridia; Eubacteriales; Ruminococcaceae; Ruminococcaceae [G2]
Lower rank member(s): [Species:Ruminococcaceae [G2] bacterium HMT-085]

LINKS: Ecology Home | Life Page: Ruminococcaceae [G2]

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
ND:Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Ruminococcaceae [G2]

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0	0	0	0	0.01	0.16	0.04	0.05	0.04	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0.01	0.03	0.58	0.10	0.17	0.09	0
Stdev	0.01	0.01	0.02	0.01	0.02	0.32	0.12	0.10	0.10	0
Prev(%)	6.49	7.79	2.60	12.99	33.77	57.14	32.47	45.45	38.96	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.01	0.01	0	0.01	0.04	0.45	0.13	0.10	0.06	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.03	0.01	0	0.05	0.12	1.29	0.42	0.33	0.17	0
Stdev	0.10	0.03	0.01	0.03	0.06	0.71	0.21	0.17	0.13	0
Prev(%)	14.19	10.81	6.76	24.32	45.95	74.32	61.49	54.73	50.00	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0	0	0.01	0.05	0.49	0.12	0.14	0.07	0	0	0	0.01	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.02	0	0	0.04	0.10	1.45	0.35	0.26	0.15	0	0	0	0	0	0	0	0	0
Stdev	0.13	0	0	0.02	0.12	0.83	0.21	0.59	0.13	0.04	0	0	0.07	0	0	0	0	0
Prev(%)	18.54	0	0	34.25	52.35	70.77	62.80	67.33	64.52	2.67	0	0	5.17	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0	0	0.03	0.10	0.76	0.20	0.18	0.11	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.03	0	0	0.10	0.32	2.08	0.58	0.46	0.29	0	0	0	0	0	0	0	0	0
Stdev	0.12	0	0	0.07	0.16	0.96	0.33	0.31	0.18	0	0	0	0	0	0	0	0	0
Prev(%)	21.23	0	0	34.49	54.73	82.14	62.62	69.10	67.64	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.01	0	0.01	0.01	0.01	0.02	0.06	0.10	0.03	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.01	0.01	0.02	0.02	0.03	0.04	0.13	0.14	0.07	0
Stdev	0.03	0.01	0.02	0.02	0.02	0.04	0.07	0.27	0.03	0
Prev(%)	21.62	23.53	41.86	65.71	53.57	76.00	81.82	87.10	80.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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