HOMD ::Genus:Stomatobaculum

Genus: Stomatobaculum

Full Lineage: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Stomatobaculum
Lower rank member(s): [Species:Stomatobaculum longum] [Species:Stomatobaculum sp. HMT-373] [Species:Stomatobaculum sp. HMT-910]

LINKS: Ecology Home | Life Page: Stomatobaculum

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Stomatobaculum

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.04	0.02	0.16	0.01	0.04	0.02	0.11	0.25	0.28	0.30	0.01	0	0	0.01	0	0	0	0.06
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0.02	0.01	0.04	0.02	0.02	0	0	0	0.01	0	0	0	0.01
90^thp	0.11	0.04	0.50	0.02	0.09	0.02	0.25	0.56	0.30	0.85	0.02	0	0	0.01	0	0.01	0.01	0.12
Stdev	0.08	0.06	0.28	0.03	0.08	0	0.15	0.23	0.71	0.47	0.03	0	0	0	0	0.01	0.01	0.07
Prev(%)	29.17	15.44	41.67	13.33	6.50	0	25.00	57.14	36.36	65.01	3.08	0	0	0	0	0	0	0.27

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.02	0.01	0	0.04	0.08	0.07	0.32	0.21	0.18	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.05	0.02	0	0.07	0.17	0.20	0.94	0.47	0.55	0
Stdev	0.05	0.06	0.02	0.08	0.20	0.15	0.57	0.53	0.34	0.01
Prev(%)	25.97	19.48	5.20	38.96	48.05	41.56	63.64	54.55	53.25	5.20

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.04	0.04	0.01	0.09	0.27	0.21	0.61	0.50	0.54	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0.03	0	0	0
90^thp	0.10	0.09	0.04	0.23	0.64	0.50	1.66	1.25	1.25	0
Stdev	0.12	0.14	0.04	0.16	0.43	0.29	0.93	0.80	0.87	0
Prev(%)	35.13	31.08	22.30	64.19	85.81	89.19	91.22	85.81	87.84	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.04	0	0.02	0.14	0.45	0.30	0.83	0.77	0.89	0.01	0.01	0	0.05	0.03	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0.05	0.09	0.04	0	0	0	0	0	0	0	0	0
90^thp	0.08	0	0.06	0.32	0.99	0.73	1.97	1.51	1.97	0.01	0	0	0.03	0.03	0	0	0	0
Stdev	0.18	0	0.06	0.22	0.63	0.43	0.77	0.83	1.08	0.07	0.09	0	0.30	0.16	0	0	0	0
Prev(%)	44.37	0	37.06	79.45	88.59	77.69	94.34	96.00	94.84	11.67	7.76	0	10.92	11.52	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.07	0.05	0	0.13	0.38	0.20	0.85	0.68	0.80	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.17	0.10	0	0.34	1.23	0.56	2.65	1.99	2.47	0	0	0	0	0	0	0	0	0
Stdev	0.24	0.17	0	0.34	0.78	0.40	1.39	1.28	1.46	0	0	0	0	0	0	0	0	0
Prev(%)	44.69	42.93	0	44.42	53.20	59.82	66.98	63.26	63.99	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.10	0.07	0.06	0.02	0.02	0.10	0.07	0.09	0.10	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.12	0.20	0.12	0.05	0.04	0.20	0.18	0.29	0.28	0
Stdev	0.30	0.14	0.17	0.05	0.04	0.21	0.10	0.14	0.20	0
Prev(%)	52.70	61.77	53.49	65.71	67.86	76.00	87.88	80.64	77.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.03	0.02	0.17	0.02	0.11	0.11	0.23	0.34	0.71	0.82	0.01	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.11	0	0	0.10	0.11	0	0	0	0	0	0	0	0
90^thp	0.12	0.05	0.58	0.05	0.35	0.11	0.69	0.74	1.89	1.76	0	0	0	0	0	0	0	0
Stdev	0.07	0.07	0.30	0.05	0.24	0	0.36	0.35	1.13	0.81	0.06	0	0	0	0	0	0.03	0.06
Prev(%)	33.33	26.26	50.00	23.53	50.80	100.00	75.00	75.00	92.00	96.95	0.90	0	0	0	0	0	0.51	0.73

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