Species: Selenomonas sp. HMT-479 (HMT-0479) Primary Body Site: Oral
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| HMT-0479: [Body Sites Data]
[Taxon Description]
| Life Page: Selenomonas sp. HMT-479
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes
Eren V1-V3 www.pnas.org
(Data from healthy subjects.)
Notes:
reads equally close to S. infelix, S. sp. HMT 479, and S. sp. HMT 481 were assigned one third to each taxon
reads equally close to S. infelix, S. sp. HMT 479, and S. sp. HMT 481 were assigned one third to each taxon
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.06 | 0.04 | 0.01 | 0 | 0 | 0.03 | 0.01 | 0.01 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.15 | 0.07 | 0.01 | 0.01 | 0 | 0.04 | 0.01 | 0.01 | 0 | 0 |
| Stdev | 0.16 | 0.10 | 0.03 | 0.01 | 0.01 | 0.10 | 0.05 | 0.01 | 0 | 0 |
| Prev(%) | 61.04 | 45.45 | 14.29 | 14.29 | 10.39 | 40.26 | 11.69 | 25.97 | 3.90 | 0 |
Eren V3-V5 www.pnas.org
(Data from healthy subjects.)
Notes:
Reads equally close to C. periodontii, S. artemidis, S. dianae, S. infelix, and S. spp. HMT 126, 133, 137, 138, 146, 479, 481, 892, 919, 920, 936, and 937 were divided equally among taxa.
Reads equally close to C. periodontii, S. artemidis, S. dianae, S. infelix, and S. spp. HMT 126, 133, 137, 138, 146, 479, 481, 892, 919, 920, 936, and 937 were divided equally among taxa.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.07 | 0.06 | 0.01 | 0 | 0 | 0.02 | 0 | 0.01 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.17 | 0.15 | 0.02 | 0.01 | 0.01 | 0.04 | 0.01 | 0.02 | 0 | 0 |
| Stdev | 0.08 | 0.07 | 0.05 | 0.01 | 0 | 0.04 | 0.01 | 0.03 | 0 | 0 |
| Prev(%) | 93.24 | 89.19 | 29.05 | 47.30 | 37.16 | 85.14 | 46.62 | 56.08 | 18.24 | 0 |
Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
Notes:
HMTs 479-481-639-919 were not present singularly so these reads were split evenly at this body site (PTO)
HMTs 479-481-639 were not present singularly so these reads were split evenly at these sites (SAL,SUPP,THR)
Some of the reads equidistant from these taxa (479-481-639-919) are included in HMT-479 because they are too close to differentiate at this site (SUPP).
HMTs 479-481-639-919 were not present singularly so these reads were split evenly at this body site (PTO)
HMTs 479-481-639 were not present singularly so these reads were split evenly at these sites (SAL,SUPP,THR)
Some of the reads equidistant from these taxa (479-481-639-919) are included in HMT-479 because they are too close to differentiate at this site (SUPP).
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0 | 0.04 | 0 | 0 | 0 | 0.04 | 0.04 | 0.05 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0 | 0.10 | 0 | 0 | 0 | 0.10 | 0.05 | 0.10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Stdev | 0 | 0.10 | 0 | 0 | 0 | 0.07 | 0.16 | 0.21 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Prev(%) | 0 | 56.83 | 0 | 0 | 0 | 66.96 | 42.68 | 56.45 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
| Avg (%) | 0.01 | 0.02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.03 | 0.03 | 0 | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 |
| Stdev | 0.01 | 0.07 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Prev(%) | 40.54 | 47.06 | 9.30 | 22.86 | 17.86 | 16.00 | 18.18 | 6.45 | 5.00 | 0 |
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes
