HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Abundance by Habitat

Download Options
[Select a Rank:]

Rank Level: Class: List of the ten most abundant taxa at each oral site.
The abundance values are taken by averaging the available relative abundance data from the four studies:
Eren (2014) V1-V3 and V3-V5 HMP RefSeq (V1-V3 and V3-V5) Data and Dewhirst (unpublished)
Subgingival Plaque (oral)(all)
Class
% Abund
Alphaproteobacteria0.005
Alphaproteobacteria0.005
Alphaproteobacteria0.005
Alphaproteobacteria0.005
Alphaproteobacteria0.005
Alphaproteobacteria0.005
Alphaproteobacteria0.005
Alphaproteobacteria0.005
Alphaproteobacteria0.005
Alphaproteobacteria0.005
Sum:0.050
Supragingival Plaque (oral)(all)
Class
% Abund
Alphaproteobacteria0.006
Alphaproteobacteria0.006
Alphaproteobacteria0.006
Alphaproteobacteria0.006
Alphaproteobacteria0.006
Alphaproteobacteria0.006
Alphaproteobacteria0.006
Alphaproteobacteria0.006
Alphaproteobacteria0.006
Alphaproteobacteria0.006
Sum:0.060
Attached Keratinized Gingiva (oral)(all)
Class
% Abund
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Sum:0.200
Buccal Mucosa (oral)(all)
Class
% Abund
Alphaproteobacteria0.010
Alphaproteobacteria0.010
Alphaproteobacteria0.010
Alphaproteobacteria0.010
Alphaproteobacteria0.010
Alphaproteobacteria0.010
Alphaproteobacteria0.010
Alphaproteobacteria0.010
Alphaproteobacteria0.010
Alphaproteobacteria0.010
Sum:0.100
Hard Palate (oral)(all)
Class
% Abund
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Alphaproteobacteria0.020
Sum:0.200
Saliva (oral)(all)
Class
% Abund
Alphaproteobacteria0.041
Alphaproteobacteria0.041
Alphaproteobacteria0.041
Alphaproteobacteria0.041
Alphaproteobacteria0.041
Alphaproteobacteria0.041
Alphaproteobacteria0.041
Alphaproteobacteria0.041
Alphaproteobacteria0.041
Alphaproteobacteria0.041
Sum:0.410
Throat (oral)(all)
Class
% Abund
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Sum:0.520
Palatine Tonsils (oral)(all)
Class
% Abund
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Alphaproteobacteria0.052
Sum:0.520
Tongue Dorsum (oral)(all)
Class
% Abund
Alphaproteobacteria0.002
Alphaproteobacteria0.002
Alphaproteobacteria0.002
Alphaproteobacteria0.002
Alphaproteobacteria0.002
Alphaproteobacteria0.002
Alphaproteobacteria0.002
Alphaproteobacteria0.002
Alphaproteobacteria0.002
Alphaproteobacteria0.002
Sum:0.020
Anterior Nares (nasal)(all)
Class
% Abund
Alphaproteobacteria0.113
Alphaproteobacteria0.113
Alphaproteobacteria0.113
Alphaproteobacteria0.113
Alphaproteobacteria0.113
Alphaproteobacteria0.113
Alphaproteobacteria0.113
Alphaproteobacteria0.113
Alphaproteobacteria0.113
Alphaproteobacteria0.113
Sum:1.130
L_Retroauricular Crease (skin)(all)
Class
% Abund
Alphaproteobacteria0.227
Alphaproteobacteria0.227
Alphaproteobacteria0.227
Alphaproteobacteria0.227
Alphaproteobacteria0.227
Alphaproteobacteria0.227
Alphaproteobacteria0.227
Alphaproteobacteria0.227
Alphaproteobacteria0.227
Alphaproteobacteria0.227
Sum:2.270
R_Retroauricular Crease (skin)(all)
Class
% Abund
Alphaproteobacteria0.300
Alphaproteobacteria0.300
Alphaproteobacteria0.300
Alphaproteobacteria0.300
Alphaproteobacteria0.300
Alphaproteobacteria0.300
Alphaproteobacteria0.300
Alphaproteobacteria0.300
Alphaproteobacteria0.300
Alphaproteobacteria0.300
Sum:3.000
L_Antecubital Fossa (skin)(all)
Class
% Abund
Alphaproteobacteria1.393
Alphaproteobacteria1.393
Alphaproteobacteria1.393
Alphaproteobacteria1.393
Alphaproteobacteria1.393
Alphaproteobacteria1.393
Alphaproteobacteria1.393
Alphaproteobacteria1.393
Alphaproteobacteria1.393
Alphaproteobacteria1.393
Sum:13.930
R_Antecubital Fossa (skin)(all)
Class
% Abund
Alphaproteobacteria1.161
Alphaproteobacteria1.161
Alphaproteobacteria1.161
Alphaproteobacteria1.161
Alphaproteobacteria1.161
Alphaproteobacteria1.161
Alphaproteobacteria1.161
Alphaproteobacteria1.161
Alphaproteobacteria1.161
Alphaproteobacteria1.161
Sum:11.610
Vaginal Introitus (vaginal)(all)
Class
% Abund
Alphaproteobacteria0.021
Alphaproteobacteria0.021
Alphaproteobacteria0.021
Alphaproteobacteria0.021
Alphaproteobacteria0.021
Alphaproteobacteria0.021
Alphaproteobacteria0.021
Alphaproteobacteria0.021
Alphaproteobacteria0.021
Alphaproteobacteria0.021
Sum:0.210
Mid Vagina (vaginal)(all)
Class
% Abund
Alphaproteobacteria0.027
Alphaproteobacteria0.027
Alphaproteobacteria0.027
Alphaproteobacteria0.027
Alphaproteobacteria0.027
Alphaproteobacteria0.027
Alphaproteobacteria0.027
Alphaproteobacteria0.027
Alphaproteobacteria0.027
Alphaproteobacteria0.027
Sum:0.270
Posterior Fornix (vaginal)(all)
Class
% Abund
Alphaproteobacteria0.009
Alphaproteobacteria0.009
Alphaproteobacteria0.009
Alphaproteobacteria0.009
Alphaproteobacteria0.009
Alphaproteobacteria0.009
Alphaproteobacteria0.009
Alphaproteobacteria0.009
Alphaproteobacteria0.009
Alphaproteobacteria0.009
Sum:0.090
Stool (gut)(all)
Class
% Abund
Alphaproteobacteria0.007
Alphaproteobacteria0.007
Alphaproteobacteria0.007
Alphaproteobacteria0.007
Alphaproteobacteria0.007
Alphaproteobacteria0.007
Alphaproteobacteria0.007
Alphaproteobacteria0.007
Alphaproteobacteria0.007
Alphaproteobacteria0.007
Sum:0.070