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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Abundance by Habitat

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Rank Level: Phylum: List of the ten most abundant taxa at each oral site.
The abundance values are taken by averaging the available relative abundance data from the four studies:
Eren (2014) V1-V3 and V3-V5 HMP RefSeq (V1-V3 and V3-V5) Data and Dewhirst (unpublished)
Subgingival Plaque (oral)(all)
Phylum
% Abund
Pseudomonadota13.694
Pseudomonadota13.694
Pseudomonadota13.694
Pseudomonadota13.694
Pseudomonadota13.694
Pseudomonadota13.694
Pseudomonadota13.694
Pseudomonadota13.694
Pseudomonadota13.694
Pseudomonadota13.694
Sum:136.940
Supragingival Plaque (oral)(all)
Phylum
% Abund
Pseudomonadota17.128
Pseudomonadota17.128
Pseudomonadota17.128
Pseudomonadota17.128
Pseudomonadota17.128
Pseudomonadota17.128
Pseudomonadota17.128
Pseudomonadota17.128
Pseudomonadota17.128
Pseudomonadota17.128
Sum:171.280
Attached Keratinized Gingiva (oral)(all)
Phylum
% Abund
Pseudomonadota20.551
Pseudomonadota20.551
Pseudomonadota20.551
Pseudomonadota20.551
Pseudomonadota20.551
Pseudomonadota20.551
Pseudomonadota20.551
Pseudomonadota20.551
Pseudomonadota20.551
Pseudomonadota20.551
Sum:205.510
Buccal Mucosa (oral)(all)
Phylum
% Abund
Pseudomonadota16.922
Pseudomonadota16.922
Pseudomonadota16.922
Pseudomonadota16.922
Pseudomonadota16.922
Pseudomonadota16.922
Pseudomonadota16.922
Pseudomonadota16.922
Pseudomonadota16.922
Pseudomonadota16.922
Sum:169.220
Hard Palate (oral)(all)
Phylum
% Abund
Pseudomonadota15.572
Pseudomonadota15.572
Pseudomonadota15.572
Pseudomonadota15.572
Pseudomonadota15.572
Pseudomonadota15.572
Pseudomonadota15.572
Pseudomonadota15.572
Pseudomonadota15.572
Pseudomonadota15.572
Sum:155.720
Saliva (oral)(all)
Phylum
% Abund
Pseudomonadota17.740
Pseudomonadota17.740
Pseudomonadota17.740
Pseudomonadota17.740
Pseudomonadota17.740
Pseudomonadota17.740
Pseudomonadota17.740
Pseudomonadota17.740
Pseudomonadota17.740
Pseudomonadota17.740
Sum:177.400
Throat (oral)(all)
Phylum
% Abund
Pseudomonadota14.118
Pseudomonadota14.118
Pseudomonadota14.118
Pseudomonadota14.118
Pseudomonadota14.118
Pseudomonadota14.118
Pseudomonadota14.118
Pseudomonadota14.118
Pseudomonadota14.118
Pseudomonadota14.118
Sum:141.180
Palatine Tonsils (oral)(all)
Phylum
% Abund
Pseudomonadota13.444
Pseudomonadota13.444
Pseudomonadota13.444
Pseudomonadota13.444
Pseudomonadota13.444
Pseudomonadota13.444
Pseudomonadota13.444
Pseudomonadota13.444
Pseudomonadota13.444
Pseudomonadota13.444
Sum:134.440
Tongue Dorsum (oral)(all)
Phylum
% Abund
Pseudomonadota17.947
Pseudomonadota17.947
Pseudomonadota17.947
Pseudomonadota17.947
Pseudomonadota17.947
Pseudomonadota17.947
Pseudomonadota17.947
Pseudomonadota17.947
Pseudomonadota17.947
Pseudomonadota17.947
Sum:179.470
Anterior Nares (nasal)(all)
Phylum
% Abund
Pseudomonadota5.639
Pseudomonadota5.639
Pseudomonadota5.639
Pseudomonadota5.639
Pseudomonadota5.639
Pseudomonadota5.639
Pseudomonadota5.639
Pseudomonadota5.639
Pseudomonadota5.639
Pseudomonadota5.639
Sum:56.390
L_Retroauricular Crease (skin)(all)
Phylum
% Abund
Pseudomonadota3.716
Pseudomonadota3.716
Pseudomonadota3.716
Pseudomonadota3.716
Pseudomonadota3.716
Pseudomonadota3.716
Pseudomonadota3.716
Pseudomonadota3.716
Pseudomonadota3.716
Pseudomonadota3.716
Sum:37.160
R_Retroauricular Crease (skin)(all)
Phylum
% Abund
Pseudomonadota4.649
Pseudomonadota4.649
Pseudomonadota4.649
Pseudomonadota4.649
Pseudomonadota4.649
Pseudomonadota4.649
Pseudomonadota4.649
Pseudomonadota4.649
Pseudomonadota4.649
Pseudomonadota4.649
Sum:46.490
L_Antecubital Fossa (skin)(all)
Phylum
% Abund
Pseudomonadota9.448
Pseudomonadota9.448
Pseudomonadota9.448
Pseudomonadota9.448
Pseudomonadota9.448
Pseudomonadota9.448
Pseudomonadota9.448
Pseudomonadota9.448
Pseudomonadota9.448
Pseudomonadota9.448
Sum:94.480
R_Antecubital Fossa (skin)(all)
Phylum
% Abund
Pseudomonadota9.462
Pseudomonadota9.462
Pseudomonadota9.462
Pseudomonadota9.462
Pseudomonadota9.462
Pseudomonadota9.462
Pseudomonadota9.462
Pseudomonadota9.462
Pseudomonadota9.462
Pseudomonadota9.462
Sum:94.620
Vaginal Introitus (vaginal)(all)
Phylum
% Abund
Pseudomonadota0.886
Pseudomonadota0.886
Pseudomonadota0.886
Pseudomonadota0.886
Pseudomonadota0.886
Pseudomonadota0.886
Pseudomonadota0.886
Pseudomonadota0.886
Pseudomonadota0.886
Pseudomonadota0.886
Sum:8.860
Mid Vagina (vaginal)(all)
Phylum
% Abund
Pseudomonadota0.569
Pseudomonadota0.569
Pseudomonadota0.569
Pseudomonadota0.569
Pseudomonadota0.569
Pseudomonadota0.569
Pseudomonadota0.569
Pseudomonadota0.569
Pseudomonadota0.569
Pseudomonadota0.569
Sum:5.690
Posterior Fornix (vaginal)(all)
Phylum
% Abund
Pseudomonadota0.059
Pseudomonadota0.059
Pseudomonadota0.059
Pseudomonadota0.059
Pseudomonadota0.059
Pseudomonadota0.059
Pseudomonadota0.059
Pseudomonadota0.059
Pseudomonadota0.059
Pseudomonadota0.059
Sum:0.590
Stool (gut)(all)
Phylum
% Abund
Pseudomonadota0.057
Pseudomonadota0.057
Pseudomonadota0.057
Pseudomonadota0.057
Pseudomonadota0.057
Pseudomonadota0.057
Pseudomonadota0.057
Pseudomonadota0.057
Pseudomonadota0.057
Pseudomonadota0.057
Sum:0.570