HOMD ::Species:Streptococcus constellatus

Species: Streptococcus constellatus (HMT-0576) Primary Body Site: Oral

Full Lineage: Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus constellatus

LINKS: Ecology Home | HMT-0576: [Body Sites Data] [Taxon Description] | Life Page: Streptococcus constellatus

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Streptococcus constellatus

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.07	0.02	0.16	0.05	0.04	0.02	0.03	0.01	0.16	0.01	0	0	0	0.08	0	0	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0.01	0.01	0.01	0.02	0.02	0.01	0	0.01	0	0	0	0	0.08	0	0	0	0
90^thp	0.17	0.05	0.39	0.11	0.07	0.02	0.05	0.01	0.43	0.01	0.01	0	0	0.08	0	0	0.01	0
Stdev	0.06	0.02	0.22	0.04	0.03	0	0.02	0	0.38	0.01	0	0.01	0	0	0	0	0.01	0
Prev(%)	12.50	6.58	29.17	0	0	0	0	0	27.27	0.71	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.01	0	0	0	0.03	0.10	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0.07	0.21	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0.10	0	0	0	0.13	0.39	0	0	0.05	0	0	0	0	0	0	0
Prev(%)	0	0	6.29	0	0	0	19.64	40.00	0	0	1.72	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.04	0	0.02	0	0	0	0.06	0.24	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.09	0	0	0	0	0	0.12	0.39	0	0	0	0	0	0	0	0	0	0
Stdev	0.11	0	0.23	0	0	0	0.22	1.08	0	0	0	0	0	0	0	0	0	0
Prev(%)	33.09	0	7.41	0	0	0	24.92	39.90	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

Notes:
Reads equally close to HMT 576 and 644 were assigned half to each taxon.

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.11	0.09	0.02	0.03	0.04	0.02	0.02	0.03	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.28	0.17	0.08	0.04	0.12	0.08	0.04	0.08	0	0
Stdev	0.21	0.19	0.05	0.07	0.06	0.03	0.07	0.04	0	0
Prev(%)	83.78	88.23	55.81	80.00	82.14	68.00	60.61	70.97	17.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0	0.12	0	0	0	0.01	0.01	0.14	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.03	0	0.39	0	0	0	0.02	0	0.31	0	0	0	0	0	0	0	0	0
Stdev	0.02	0.02	0.25	0	0.03	0	0.01	0.03	0.47	0	0	0	0	0	0	0	0	0
Prev(%)	20.83	8.08	50.00	0	0.53	0	25.00	6.25	24.00	0.94	0	0	0	0	0	0	0	0

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